RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 OR1F2PQ96R84 312 aa16.87■□□□□ 0.29
SSB-206ENST00000461708 CES2O00748 559 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 HNRNPRO43390 633 aaKnown RBP16.86■□□□□ 0.29
SSB-206ENST00000461708 SEC24DO94855 1032 aaPredicted RBP16.86■□□□□ 0.29
SSB-206ENST00000461708 HIST1H2AGP0C0S8 130 aaPredicted RBP16.86■□□□□ 0.29
SSB-206ENST00000461708 SLC35G6P0C7Q6 338 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 NPPBP16860 134 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 HIST1H2ADP20671 130 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 GABRB3P28472 473 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 AP1S2P56377 157 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 ZNF33BQ06732 778 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 DHX9Q08211 1270 aaKnown RBP16.86■□□□□ 0.29
SSB-206ENST00000461708 NAE1Q13564 534 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 EXT1Q16394 746 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 BTBD16Q32M84 506 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 SPANXN3Q5MJ09 141 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 ACER2Q5QJU3 275 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 CAPN13Q6MZZ7 669 aaPredicted RBP16.86■□□□□ 0.29
SSB-206ENST00000461708 NIPAL1Q6NVV3 410 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 MTFR2Q6P444 385 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 PAQR3Q6TCH7 311 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 GFRALQ6UXV0 394 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 ANKRD37Q7Z713 158 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 STRA8Q7Z7C7 330 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 FJX1Q86VR8 437 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 AFAP1L2Q8N4X5 818 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 OR4K1Q8NGD4 311 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 M1APQ8TC57 530 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 SLCO2A1Q92959 643 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 HIST1H2AHQ96KK5 128 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 NDNQ99608 321 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 HIST1H2AJQ99878 128 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 H2AFJQ9BTM1 129 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 ATG10Q9H0Y0 220 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 SH2B3Q9UQQ2 575 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 TACC2O95359 2948 aa16.86■□□□□ 0.29
SSB-206ENST00000461708 SGK494L7N484 410 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 LCMT2O60294 686 aaKnown RBP16.85■□□□□ 0.29
SSB-206ENST00000461708 TSPAN12O95859 305 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 IL1RNP18510 177 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 CCR8P51685 355 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 CDKN2DP55273 166 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 KCNK10P57789 538 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 SKP1P63208 163 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 ART3Q13508 389 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 PWP1Q13610 501 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 HERC3Q15034 1050 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 PHKG1Q16816 387 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 TMEM207Q6UWW9 146 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 LANCL3Q6ZV70 420 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 SLC26A11Q86WA9 606 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 PDSS2Q86YH6 399 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 LGI4Q8N135 537 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 KCT2Q8NC54 265 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 MMP25Q9NPA2 562 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 HCN3Q9P1Z3 774 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 COPG2Q9UBF2 871 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 CORO1CQ9ULV4 474 aaPredicted RBP16.85■□□□□ 0.29
SSB-206ENST00000461708 KLF2Q9Y5W3 355 aaPredicted RBP16.85■□□□□ 0.29
SSB-206ENST00000461708 PKDREJQ9NTG1 2253 aa16.85■□□□□ 0.29
SSB-206ENST00000461708 A8MUI8 341 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 MAGEB17A8MXT2 336 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 DNALI1O14645 258 aaPredicted RBP16.84■□□□□ 0.29
SSB-206ENST00000461708 UNC5CO95185 931 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 F10P00742 488 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 AHSGP02765 367 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 STATHP02808 62 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 CDH1P12830 882 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 MST1P26927 711 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 IL2P60568 153 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 RHAGQ02094 409 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 RBPJQ06330 500 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 PPP1R7Q15435 360 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 MFSD4BQ5TF39 518 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 MBOAT1Q6ZNC8 495 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 ATL1Q8WXF7 558 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 LINGO1Q96FE5 620 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 MACROD1Q9BQ69 325 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 TRIM54Q9BYV2 358 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 CLK4Q9HAZ1 481 aaKnown RBP16.84■□□□□ 0.29
SSB-206ENST00000461708 SUCOQ9UBS9 1254 aaKnown RBP16.84■□□□□ 0.29
SSB-206ENST00000461708 SEC14L3Q9UDX4 400 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 NAALAD2Q9Y3Q0 740 aa16.84■□□□□ 0.29
SSB-206ENST00000461708 IGHV3-20A0A0C4DH32 117 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 TRBC2A0A5B9 178 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 FEZF1A0PJY2 475 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 ENO2P09104 434 aaPredicted RBP16.83■□□□□ 0.28
SSB-206ENST00000461708 NSDHLQ15738 373 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 MEP1AQ16819 746 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 ZXDCQ2QGD7 858 aaPredicted RBP16.83■□□□□ 0.28
SSB-206ENST00000461708 ZNF766Q5HY98 468 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 RBM20Q5T481 1227 aaKnown RBP16.83■□□□□ 0.28
SSB-206ENST00000461708 OTOGQ6ZRI0 2925 aa16.83■□□□□ 0.28
SSB-206ENST00000461708 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms