RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 UBL7Q96S82 380 aaPredicted RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 CHST8Q9H2A9 424 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 KLHL20Q9Y2M5 609 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 TERTO14746 1132 aaKnown RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 RGS16O15492 202 aaPredicted RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 TSFMP43897 325 aaKnown RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 CDC20Q12834 499 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 CHIT1Q13231 466 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 GTF2H2Q13888 395 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 GTF2H2CQ6P1K8 395 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 HPS6Q86YV9 775 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 STARD8Q92502 1023 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 PMEPA1Q969W9 287 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SLC29A3Q9BZD2 475 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 ADNPQ9H2P0 1102 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 ACTR8Q9H981 624 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SEMA3GQ9NS98 782 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SPACA6W5XKT8 324 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 TLDC2A0PJX2 215 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 CREG1O75629 220 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 SNUPNO95149 360 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 RPS17P08708 135 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 PYGBP11216 843 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 MTHFD2P13995 350 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 BCL6P41182 706 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 PKNOX1P55347 436 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 RBBP5Q15291 538 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 TMEM214Q6NUQ4 689 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 ZYG11AQ6WRX3 759 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 LAS2Q8IYD9 372 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 SPATA6LQ8N4H0 392 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TEX9Q8N6V9 391 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 NRTNQ99748 197 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ZNF282Q9UDV7 671 aaPredicted RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBR4-208ENST00000459947 RUVBL1Q9Y265 456 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 LOC101059948A0A1B0GTJ6 334 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 AGRPO00253 132 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 PEX12O00623 359 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ENO1P06733 434 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 SERPINB5P36952 375 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 CCNG1P51959 295 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 DNAJB13P59910 316 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 SSPNQ14714 243 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 FAM20CQ8IXL6 584 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 L3MBTL4Q8NA19 623 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 COL26A1Q96A83 441 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 NAF1Q96HR8 494 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 FAR2Q96K12 515 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 OR1F2PQ96R84 312 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TRMOQ9BU70 441 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 NTMT1Q9BV86 223 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 GEMIN8Q9NWZ8 242 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 C19orf25Q9UFG5 118 aaPredicted RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 TBK1Q9UHD2 729 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 MAP4K5Q9Y4K4 846 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 SDK2Q58EX2 2172 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TIAF1O95411 115 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 CLDN9O95484 217 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 SHBGP04278 402 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ALOX12P18054 663 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ALAS2P22557 587 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 JAK1P23458 1154 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 EEF1DP29692 281 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 HERVK_113P63132 956 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 FRMPD2BQ6IN97 320 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 CHSY3Q70JA7 882 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TRABD2AQ86V40 505 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 OR2Y1Q8NGV0 311 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 EPS8L3Q8TE67 593 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 L3HYPDHQ96EM0 354 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 CMTM7Q96FZ5 175 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ERVK-6Q9BXR3 956 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 PRM3Q9NNZ6 103 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 RYDENQ9NUL5 291 aaKnown RBP10.19□□□□□ -0.78
UBR4-208ENST00000459947 AHSPQ9NZD4 102 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 TUBD1Q9UJT1 453 aa10.19□□□□□ -0.78
UBR4-208ENST00000459947 IGLV3-12A0A075B6K2 115 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 CXADRP78310 365 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 DOC2AQ14183 400 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SLC9A5Q14940 896 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 UBAP2Q5T6F2 1119 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 TRIM40Q6P9F5 258 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 VN1R4Q7Z5H5 301 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 PLD6Q8N2A8 252 aaKnown RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 FER1L6-AS2Q96M78 137 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 SLC6A16Q9GZN6 736 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 COPS7BQ9H9Q2 264 aaPredicted RBP10.18□□□□□ -0.78
UBR4-208ENST00000459947 PCDHGB7Q9Y5F8 929 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 LOC105369274A0A096LPK9 316 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 LOC102723532A0A0G2JNH3 316 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 KRT87PA6NCN2 255 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 H0YIV9 168 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 NDUFS4O43181 175 aa10.18□□□□□ -0.78
UBR4-208ENST00000459947 HSD3B1P14060 373 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms