RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TIFABQ6ZNK6 161 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 SLCO4C1Q6ZQN7 724 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 METTL27Q8N6F8 245 aaPredicted RBP15.36■□□□□ 0.05
CD28-203ENST00000458610 BBC3Q96PG8 261 aaPredicted RBP15.36■□□□□ 0.05
CD28-203ENST00000458610 EFCAB11Q9BUY7 163 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 NT5DC2Q9H857 520 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 SEMA3GQ9NS98 782 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 C14orf105Q9NVL8 296 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 OPTCQ9UBM4 332 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 TRPC4Q9UBN4 977 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 MAP4K5Q9Y4K4 846 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 ANGPTL3Q9Y5C1 460 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
CD28-203ENST00000458610 A0A0A6YYC8 382 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 VSTM2BA6NLU5 285 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 I3L1I5 382 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 UBXN8O00124 270 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 PCDH17O14917 1159 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 P2RX6O15547 441 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 SERPIND1P05546 499 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 FAM87AP0C7U9 286 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 GFAPP14136 432 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 MMP11P24347 488 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 GLRBP48167 497 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 ALDH18A1P54886 795 aaKnown RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 IRF9Q00978 393 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 MEF2AQ02078 507 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 LY6DQ14210 128 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 C18orf21Q32NC0 220 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 XKR6Q5GH73 641 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 METTL2BQ6P1Q9 378 aaKnown RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 TMIGD1Q6UXZ0 262 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 ABHD13Q7L211 337 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 ARHGEF39Q8N4T4 335 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 EXD3Q8N9H8 876 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 NT5CQ8TCD5 201 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 STT3BQ8TCJ2 826 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 UBLCP1Q8WVY7 318 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 UBE2E3Q969T4 207 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 PTCD3Q96EY7 689 aaKnown RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 SCYL1Q96KG9 808 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 TMEM79Q9BSE2 394 aa15.35■□□□□ 0.05
CD28-203ENST00000458610 CLK4Q9HAZ1 481 aaKnown RBP15.35■□□□□ 0.05
CD28-203ENST00000458610 IGLV3-12A0A075B6K2 115 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 ARGFXA6NJG6 315 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 K7EPI3 171 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 NDUFS4O43181 175 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 FOXS1O43638 330 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 MED26O95402 600 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 ZGLP1P0C6A0 271 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 EPB42P16452 691 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 IL10P22301 178 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 DEKP35659 375 aaKnown RBP15.34■□□□□ 0.05
CD28-203ENST00000458610 PIK3CGP48736 1102 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 IRF8Q02556 426 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 C19orf57Q0VDD7 668 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 TBCCQ15814 346 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 COX15Q7KZN9 410 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 C9orf43Q8TAL5 461 aaPredicted RBP15.34■□□□□ 0.05
CD28-203ENST00000458610 UBTD2Q8WUN7 234 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 ESAMQ96AP7 390 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 WDR34Q96EX3 536 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 GPR78Q96P69 363 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 SPSB2Q99619 263 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 TGIF2Q9GZN2 237 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 ING2Q9H160 280 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 SLC25A18Q9H1K4 315 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 ANKZF1Q9H8Y5 726 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 SYNPO2LQ9H987 977 aa15.34■□□□□ 0.05
CD28-203ENST00000458610 PSMC3IPQ9P2W1 217 aaPredicted RBP15.34■□□□□ 0.05
CD28-203ENST00000458610 ANKRD12Q6UB98 2062 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 HEATR5BQ9P2D3 2071 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 ANKDD1BA6NHY2 528 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 KLK8O60259 260 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 CNOT3O75175 753 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 SMIM24O75264 130 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 SERPINA6P08185 405 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 ALOX12P18054 663 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 VARSP26640 1264 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 GMPRP36959 345 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 CASP2P42575 452 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 STXBP1P61764 594 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 SLBPQ14493 270 aaKnown RBP eCLIP15.33■□□□□ 0.04
CD28-203ENST00000458610 SETDB1Q15047 1291 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 PCBP2Q15366 365 aaKnown RBP eCLIP15.33■□□□□ 0.04
CD28-203ENST00000458610 RBBP7Q16576 425 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 PFKFB4Q16877 469 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 MRGPREQ86SM8 312 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 GSPT2Q8IYD1 628 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 CLEC1AQ8NC01 280 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 KCT2Q8NC54 265 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 ZNF740Q8NDX6 193 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 OR9A4Q8NGU2 314 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 ACMSDQ8TDX5 336 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 MACROD1Q9BQ69 325 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 MRPL57Q9BQC6 102 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 CRB3Q9BUF7 120 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 SOX17Q9H6I2 414 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms