RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 OR1F2PQ96R84 312 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 UTP23Q9BRU9 249 aaKnown RBP20.31■□□□□ 0.84
CPNE1-220ENST00000458038 MMP25Q9NPA2 562 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 LZTFL1Q9NQ48 299 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 FBXO5Q9UKT4 447 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 FBN2P35556 2912 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 CACNA1CQ13936 2221 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 ESRRAP11474 423 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-220ENST00000458038 CD46P15529 392 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 SLC1A2P43004 574 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 CSNK1G2P78368 415 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 ACTN3Q08043 901 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-220ENST00000458038 SP140Q13342 867 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 TUBA3CQ13748 450 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 ZXDCQ2QGD7 858 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-220ENST00000458038 ANKRD22Q5VYY1 191 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 TUBA3EQ6PEY2 450 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 PRSS41Q7RTY9 318 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 LGI4Q8N135 537 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 BEST3Q8N1M1 668 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 SLC5A8Q8N695 610 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 TMEM178AQ8NBL3 297 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 MDS2Q8NDY4 140 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 SLC13A3Q8WWT9 602 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 FAM167BQ9BTA0 163 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 PARVBQ9HBI1 364 aa20.3■□□□□ 0.84
CPNE1-220ENST00000458038 C20orf96Q9NUD7 363 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-220ENST00000458038 TRMT6Q9UJA5 497 aaKnown RBP20.3■□□□□ 0.84
CPNE1-220ENST00000458038 IGHV3-20A0A0C4DH32 117 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 SLC16A5O15375 505 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 SLC35G6P0C7Q6 338 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 COX6B1P14854 86 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 IL1RNP18510 177 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 GRNP28799 593 aaKnown RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 EEF1DP29692 281 aaKnown RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 TERF1P54274 439 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 TAS2R50P59544 299 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 HERC3Q15034 1050 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 CAPN13Q6MZZ7 669 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 PIWIL4Q7Z3Z4 852 aaKnown RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 ASPGQ86U10 573 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 CPNE9Q8IYJ1 553 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 FAM98AQ8NCA5 519 aaKnown RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 MAGED4Q96JG8 741 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 SERPINB12Q96P63 405 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 LPAR4Q99677 370 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 AARSD1Q9BTE6 412 aaKnown RBP20.29■□□□□ 0.84
CPNE1-220ENST00000458038 HCN3Q9P1Z3 774 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 ZNF835Q9Y2P0 537 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 ADGRG4Q8IZF6 3080 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 CCDC168Q8NDH2 2452 aa20.29■□□□□ 0.84
CPNE1-220ENST00000458038 MAGEB17A8MXT2 336 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 SGK494L7N484 410 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 HAUS5O94927 633 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 CXCR5P32302 372 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 CD96P40200 585 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 MAGEA3P43357 314 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 ABRAXAS2Q15018 415 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 NSDHLQ15738 373 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 PAPD4Q6PIY7 484 aaKnown RBP20.28■□□□□ 0.84
CPNE1-220ENST00000458038 AGTRAPQ6RW13 159 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 LCTLQ6UWM7 567 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 Q6ZPB1 254 aaPredicted RBP20.28■□□□□ 0.84
CPNE1-220ENST00000458038 MAGOHBQ96A72 148 aaKnown RBP20.28■□□□□ 0.84
CPNE1-220ENST00000458038 SCMH1Q96GD3 660 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 GPR137Q96N19 417 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 HAUS8Q9BT25 410 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 SARGQ9BW04 601 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 SGPP1Q9BX95 441 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 TAS2R13Q9NYV9 303 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 PDE10AQ9Y233 779 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 MAD1L1Q9Y6D9 718 aa20.28■□□□□ 0.84
CPNE1-220ENST00000458038 F8P00451 2351 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 ASPDHA6ND91 283 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 STATHP02808 62 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 HIST1H2AGP0C0S8 130 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-220ENST00000458038 HIST1H2ADP20671 130 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 SNRPNP63162 240 aaKnown RBP20.27■□□□□ 0.84
CPNE1-220ENST00000458038 MEF2AQ02078 507 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-220ENST00000458038 ALDH6A1Q02252 535 aaKnown RBP20.27■□□□□ 0.84
CPNE1-220ENST00000458038 OR1C1Q15619 314 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 SFT2D3Q587I9 215 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 SLC26A11Q86WA9 606 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 SPPL2CQ8IUH8 684 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 CRLF3Q8IUI8 442 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 TBC1D19Q8N5T2 526 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 MFSD9Q8NBP5 474 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 KCT2Q8NC54 265 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 EEF1AKMT1Q8WVE0 214 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 HIST1H2AHQ96KK5 128 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 SIGLEC12Q96PQ1 595 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 HIST1H2AJQ99878 128 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 H2AFJQ9BTM1 129 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 GPAMQ9HCL2 828 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 NAALAD2Q9Y3Q0 740 aa20.27■□□□□ 0.84
CPNE1-220ENST00000458038 FEZF1A0PJY2 475 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 LCMT2O60294 686 aaKnown RBP20.26■□□□□ 0.83
CPNE1-220ENST00000458038 RDH16O75452 317 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 JAK1P23458 1154 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms