RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 NIPSNAP2O75323 286 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 CATP04040 527 aaKnown RBP21.81■■□□□ 1.08
PTPRA-208ENST00000455631 HOXD4P09016 255 aaPredicted RBP21.81■■□□□ 1.08
PTPRA-208ENST00000455631 HSD17B2P37059 387 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 BCL6P41182 706 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 MEOX1P50221 254 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 ABATP80404 500 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 GBX1Q14549 363 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 SPA17Q15506 151 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 THEMIS2Q5TEJ8 643 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 CCDC71Q8IV32 467 aaPredicted RBP21.81■■□□□ 1.08
PTPRA-208ENST00000455631 KIF2BQ8N4N8 673 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 POGLUT1Q8NBL1 392 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 SLC35B2Q8TB61 432 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 ZCCHC10Q8TBK6 192 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 NINJ1Q92982 152 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 TSLPQ969D9 159 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 MACROD1Q9BQ69 325 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 TP63Q9H3D4 680 aaPredicted RBP21.81■■□□□ 1.08
PTPRA-208ENST00000455631 CHRAC1Q9NRG0 131 aa21.81■■□□□ 1.08
PTPRA-208ENST00000455631 USP27XA6NNY8 438 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 H7BY64 318 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 HS6ST1O60243 411 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 RDH16O75452 317 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 PSIP1O75475 530 aaKnown RBP21.8■■□□□ 1.08
PTPRA-208ENST00000455631 SLC16A8O95907 504 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 FMO4P31512 558 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 ANP32AP39687 249 aaKnown RBP21.8■■□□□ 1.08
PTPRA-208ENST00000455631 ITGA8P53708 1063 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 VN1R4Q7Z5H5 301 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 RPRMLQ8N4K4 120 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 ZNF480Q8WV37 535 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 PRAP1Q96NZ9 151 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 ANKHQ9HCJ1 492 aa21.8■■□□□ 1.08
PTPRA-208ENST00000455631 DNHD1Q96M86 4753 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 TMEM200CA6NKL6 621 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 E7ENX8 843 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 PRMT3O60678 531 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 SYF2O95926 243 aaKnown RBP21.79■■□□□ 1.08
PTPRA-208ENST00000455631 FDFT1P37268 417 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 OR4D2P58180 307 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 RHAGQ02094 409 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 TAP2Q03519 686 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 FOXD4Q12950 439 aaPredicted RBP21.79■■□□□ 1.08
PTPRA-208ENST00000455631 CEBPEQ15744 281 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 KLHL38Q2WGJ6 581 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 ACSBG2Q5FVE4 666 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 MEI1Q5TIA1 1274 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 TMEM214Q6NUQ4 689 aaKnown RBP21.79■■□□□ 1.08
PTPRA-208ENST00000455631 PCGF5Q86SE9 256 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 ZNF227Q86WZ6 799 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 PEX11GQ96HA9 241 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 SEC16BQ96JE7 1060 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 BIRC8Q96P09 236 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 SLC24A3Q9HC58 644 aa21.79■■□□□ 1.08
PTPRA-208ENST00000455631 DNAJB12Q9NXW2 375 aaKnown RBP21.79■■□□□ 1.08
PTPRA-208ENST00000455631 KLF13Q9Y2Y9 288 aaPredicted RBP21.79■■□□□ 1.08
PTPRA-208ENST00000455631 ACANP16112 2415 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 CDK2AP1O14519 115 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 KIF5CO60282 957 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 TFEBP19484 476 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 CHRM3P20309 590 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 KLF1Q13351 362 aaPredicted RBP21.78■■□□□ 1.08
PTPRA-208ENST00000455631 CLYBLQ8N0X4 340 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 PLPP5Q8NEB5 264 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 ELP5Q8TE02 316 aa21.78■■□□□ 1.08
PTPRA-208ENST00000455631 ABCA4P78363 2273 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 PHF3Q92576 2039 aaKnown RBP21.77■■□□□ 1.08
PTPRA-208ENST00000455631 ZNF860A6NHJ4 632 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 MAGEB17A8MXT2 336 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 IFNB1P01574 187 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 RPS15AP62244 130 aaKnown RBP21.77■■□□□ 1.08
PTPRA-208ENST00000455631 CRADDP78560 199 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 PMPCAQ10713 525 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 KCNJ11Q14654 390 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 CMPK2Q5EBM0 449 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 PCID2Q5JVF3 399 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 PDSS2Q86YH6 399 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 SULF2Q8IWU5 870 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 ATG4AQ8WYN0 398 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 TRIM45Q9H8W5 580 aaPredicted RBP21.77■■□□□ 1.08
PTPRA-208ENST00000455631 RAB6BQ9NRW1 208 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 TREX1Q9NSU2 369 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 GALPQ9UBC7 116 aa21.77■■□□□ 1.08
PTPRA-208ENST00000455631 FAM237BA0A1B0GVD1 139 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 TCRBV7S2A1N4TA0A589 114 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 H3BMM5 538 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 KLRC4-KLRK1H3BQV0 150 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 PDE9AO76083 593 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 APRTP07741 180 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 HLCSP50747 726 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 NUP107P57740 925 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 SESN2P58004 480 aaPredicted RBP21.76■■□□□ 1.07
PTPRA-208ENST00000455631 MLF1P58340 268 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 ARHGAP11AQ6P4F7 1023 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 KCT2Q8NC54 265 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 LPGAT1Q92604 370 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 CALR3Q96L12 384 aaKnown RBP21.76■■□□□ 1.07
PTPRA-208ENST00000455631 CCDC138Q96M89 665 aa21.76■■□□□ 1.07
PTPRA-208ENST00000455631 OR1F2PQ96R84 312 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms