RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RETP07949 1114 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 PCNAP12004 261 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 CDH1P12830 882 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 ACADSP16219 412 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 HOXB9P17482 250 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF10P21506 573 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 IL10P22301 178 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 IL12AP29459 219 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 UBE2IP63279 158 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 CSNK1G2P78368 415 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 VAC14Q08AM6 782 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 RBBP4Q09028 425 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 GK3PQ14409 553 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 CLCA4Q14CN2 919 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 PLA2G4EQ3MJ16 856 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM174BQ3ZCQ3 159 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 TIGD2Q4W5G0 525 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 SGO1Q5FBB7 561 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 WDR45BQ5MNZ6 344 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 SWT1Q5T5J6 900 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 CPTPQ5TA50 214 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 SUSD1Q6UWL2 747 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 RABEPKQ7Z6M1 372 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 NUDT13Q86X67 352 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 METTL25Q8N6Q8 603 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 PACRGLQ8N7B6 248 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 ST13P5Q8NFI4 369 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 OR2L3Q8NG85 312 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 LCN9Q8WX39 176 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 APIPQ96GX9 242 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 RSRC1Q96IZ7 334 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 APOLD1Q96LR9 279 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 BTBD9Q96Q07 612 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 KCTD14Q9BQ13 255 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 ORAI3Q9BRQ5 295 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 FAIM2Q9BWQ8 316 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 MAGIXQ9H6Y5 334 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 IMP3Q9NV31 184 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 LYARQ9NX58 379 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 WDR37Q9Y2I8 494 aa6.56□□□□□ -1.36
ECHDC1-210ENST00000454859 CROCCQ5TZA2 2017 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 BLACEA4D250 179 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 PRORSD1PA6NEY8 169 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 LILRA5A6NI73 299 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 C2orf74A8MZ97 194 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 NME4O00746 187 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 YKT6O15498 198 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 ZW10O43264 779 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 MAP3K7O43318 606 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SLITRK5O94991 958 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SOX30O94993 753 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CSF2P04141 144 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CHRM5P08912 532 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 NME1P15531 152 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 GPX2P18283 190 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CD38P28907 300 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 MAT2AP31153 395 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 HOXD12P35452 270 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 FASLGP48023 281 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CXCL12P48061 93 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 EPHA4P54764 986 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 RPS13P62277 151 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SKP1P63208 163 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 FADDQ13158 208 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 VEZF1Q14119 521 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 FZD2Q14332 565 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 UBXN2BQ14CS0 331 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM71E1Q6IPT2 247 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SCIMPQ6UWF3 145 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 LRRC74BQ6ZQY2 392 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 COMMD6Q7Z4G1 85 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM124AQ86V42 546 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CALHM3Q86XJ0 350 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 TRIM48Q8IWZ4 208 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 PQLC1Q8N2U9 271 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 C1orf52Q8N6N3 182 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC26A7Q8TE54 656 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 NAT14Q8WUY8 206 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 KLK6Q92876 244 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 MOAP1Q96BY2 351 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 REXO5Q96IC2 774 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 ECSITQ9BQ95 431 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 PAIP1Q9H074 479 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SRMSQ9H3Y6 488 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 C6orf106Q9H6K1 298 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 TBC1D17Q9HA65 648 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 ACSS1Q9NUB1 689 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CCM2LQ9NUG4 571 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 CMTM6Q9NX76 183 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SPASTQ9UBP0 616 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 TBC1D29Q9UFV1 150 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 TAC3Q9UHF0 121 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 PCDHGB4Q9UN71 923 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 KCNK6Q9Y257 313 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 DLGAP4Q9Y2H0 992 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 PCYT1BQ9Y5K3 369 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 A0A1W2PR77 199 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 ARHGAP10A1A4S6 786 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 KRBA1A5PL33 1030 aa6.55□□□□□ -1.36
ECHDC1-210ENST00000454859 SYNDIG1LA6NDD5 238 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms