RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 KLC3Q6P597 504 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 TMEM151BQ8IW70 566 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 METTL27Q8N6F8 245 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 THAP4Q8WY91 577 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 ESAMQ96AP7 390 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SEC16BQ96JE7 1060 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 CAPS2Q9BXY5 557 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 PITHD1Q9GZP4 211 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 NT5DC2Q9H857 520 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 ZNF304Q9HCX3 659 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 GEMIN8Q9NWZ8 242 aaKnown RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 XPR1Q9UBH6 696 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 ZFP69BQ9UJL9 534 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 NXT1Q9UKK6 140 aaKnown RBP13.47□□□□□ -0.25
HDAC4-205ENST00000454542 KCNMB2Q9Y691 235 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 SLC22A7Q9Y694 548 aa13.47□□□□□ -0.25
HDAC4-205ENST00000454542 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 H0YIG0 161 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 K7EPI3 171 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 PRPF4O43172 522 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 STATHP02808 62 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 SBK3P0C264 359 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 C1GALT1C1LP0DN25 315 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CD22P20273 847 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 FBLP22087 321 aaKnown RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 FOLR3P41439 243 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CASP2P42575 452 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 ALDH18A1P54886 795 aaKnown RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 HYAL2Q12891 473 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 SLBPQ14493 270 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 PCBP2Q15366 365 aaKnown RBP eCLIP13.46□□□□□ -0.258e-6■■□□□ 13.7
HDAC4-205ENST00000454542 TBCCQ15814 346 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 NDUFA9Q16795 377 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 LGSNQ5TDP6 509 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 MLIPQ5VWP3 458 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 EMBQ6PCB8 327 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 MRGPREQ86SM8 312 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 LCA5Q86VQ0 697 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.255e-6■■■■■ 81.8
HDAC4-205ENST00000454542 TMEM151AQ8N4L1 468 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 TBC1D19Q8N5T2 526 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 ACMSDQ8TDX5 336 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CREB3L4Q8TEY5 395 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 UBLCP1Q8WVY7 318 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CAVIN3Q969G5 261 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 ADNPQ9H2P0 1102 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 TUBD1Q9UJT1 453 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CDC14AQ9UNH5 594 aa13.46□□□□□ -0.25
HDAC4-205ENST00000454542 PTRH2Q9Y3E5 179 aaKnown RBP13.46□□□□□ -0.25
HDAC4-205ENST00000454542 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.26
HDAC4-205ENST00000454542 SPENQ96T58 3664 aaKnown RBP13.45□□□□□ -0.26
HDAC4-205ENST00000454542 NDUFS4O43181 175 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 OR1F1O43749 312 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-205ENST00000454542 RBP1P09455 135 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 NUDT17P0C025 328 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 CXCR2P25025 360 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 HSD17B3P37058 310 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 POLE2P56282 527 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 FOXL2P58012 376 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 SSPNQ14714 243 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 DEFB109BQ30KR1 87 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 SH2D5Q6ZV89 423 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 PRSS41Q7RTY9 318 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 VN1R5Q7Z5H4 357 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 PPP1R32Q7Z5V6 425 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 PDSS2Q86YH6 399 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 EXD3Q8N9H8 876 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 KCT2Q8NC54 265 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 TTLQ8NG68 377 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 NACC2Q96BF6 587 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 MOCOSQ96EN8 888 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 PTCD3Q96EY7 689 aaKnown RBP13.45□□□□□ -0.26
HDAC4-205ENST00000454542 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 EFCAB11Q9BUY7 163 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 TGIF2Q9GZN2 237 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 C14orf105Q9NVL8 296 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 OPTCQ9UBM4 332 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 RAB21Q9UL25 225 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 TMCO1Q9UM00 188 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 MAN2B2Q9Y2E5 1009 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 MAU2Q9Y6X3 613 aa13.45□□□□□ -0.26
HDAC4-205ENST00000454542 ATRXP46100 2492 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 A0A0A6YYC8 382 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 A0A1W2PQ72 361 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 C4orf51C9J302 202 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 STX16-NPEPL1H3BU86 382 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 I3L1I5 382 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 STX16O14662 325 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 CLGNO14967 610 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 CCNT2O60583 730 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms