RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 C2orf81A6NN90 581 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 MAP2K7O14733 419 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 PIN1P1O15428 100 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ZSCAN9O15535 394 aaPredicted RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CDC40O60508 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CALCAP01258 141 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CCDC166P0CW27 439 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF7P17097 686 aaPredicted RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 RFC3P40938 356 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GCLMP48507 274 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 MTNR1BP49286 362 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 NEK2P51955 445 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 EFNA3P52797 238 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 DSC2Q02487 901 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CEBPZQ03701 1054 aaKnown RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 IHHQ14623 411 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 HSPB2Q16082 182 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 MAPKAPK3Q16644 382 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ME3Q16798 604 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 BRMS1LQ5PSV4 323 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GARNL3Q5VVW2 1013 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 FCRLBQ6BAA4 426 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF585AQ6P3V2 769 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ZBTB46Q86UZ6 589 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GPR135Q8IZ08 494 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ZFP62Q8NB50 900 aaPredicted RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GPT2Q8TD30 523 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 TMEM171Q8WVE6 324 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 SLC7A6OSQ96CW6 309 aaPredicted RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 LRRC46Q96FV0 321 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 SCRN2Q96FV2 425 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ART5Q96L15 291 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 KCNC2Q96PR1 638 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 MED15Q96RN5 788 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 NPY6RQ99463 290 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 NCAPGQ9BPX3 1015 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 UTP23Q9BRU9 249 aaKnown RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CNPPD1Q9BV87 410 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 RIOK2Q9BVS4 552 aaKnown RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 SLC6A15Q9H2J7 730 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 OSGEPL1Q9H4B0 414 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CXorf56Q9H5V9 222 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 ATP13A3Q9H7F0 1226 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 TRIM45Q9H8W5 580 aaPredicted RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 PDFQ9HBH1 243 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 PLCB1Q9NQ66 1216 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 PDRG1Q9NUG6 133 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 MED29Q9NX70 200 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 CGNQ9P2M7 1197 aaKnown RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 DNAI1Q9UI46 699 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 TEKT2Q9UIF3 430 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 NXT1Q9UKK6 140 aaKnown RBP4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 PPIL1Q9Y3C6 166 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 TESMINQ9Y4I5 508 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 GPR45Q9Y5Y3 372 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 A0A0A6YYK5 440 aaPredicted RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 HYKKA2RU49 373 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 PDZK1P1A8MUH7 402 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 A8MUI8 341 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 E5RJQ4 531 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 M0QYV0 167 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 UBFD1O14562 309 aaKnown RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 TFECO14948 347 aaPredicted RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 TRIM13O60858 407 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 PHF2O75151 1096 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 SERPINC1P01008 464 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 IGHV4-39P01824 125 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 S100BP04271 92 aaPredicted RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 PYGLP06737 847 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 LPLP06858 475 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 ICAM2P13598 275 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 POLR2CP19387 275 aaPredicted RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CDH3P22223 829 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 SERPINA4P29622 427 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CARSP49589 748 aaKnown RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 RAB28P51157 221 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF136P52737 540 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 WNT3AP56704 352 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 NSUN2Q08J23 767 aaKnown RBP eCLIP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 TRIM25Q14258 630 aaKnown RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 C19orf54Q5BKX5 351 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 TOR2AQ5JU69 321 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CFAP58Q5T655 872 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 C1orf185Q5T7R7 199 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 MBNL2Q5VZF2 373 aaKnown RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 TLDC1Q6P9B6 456 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 SHC4Q6S5L8 630 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CCBE1Q6UXH8 406 aaPredicted RBP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 ARHGEF18Q6ZSZ5 1173 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 LARP4Q71RC2 724 aaKnown RBP eCLIP4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 BNIPLQ7Z465 357 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 PHLDB2Q86SQ0 1253 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 DAAM2Q86T65 1068 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 OOSP2Q86WS3 158 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CRLF3Q8IUI8 442 aa4.86□□□□□ -1.63
SBDSP1-204ENST00000453858 CMIPQ8IY22 773 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms