RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SLC22A4Q9H015 551 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SLC32A1Q9H598 525 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 TSPAN12O95859 305 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 CYP2A7P20853 494 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PRPS1L1P21108 318 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 GSTM5P46439 218 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SLAMF1Q13291 335 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 BCL2A1Q16548 175 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 CCDC58Q4VC31 144 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SETMARQ53H47 684 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 K7ERQ8 282 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 CASKO14936 926 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PRAMEF12O95522 483 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 CDK1P06493 297 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ANXA8P13928 327 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 BMPR1AP36894 532 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 IFITM2Q01629 132 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 KCNC4Q03721 635 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ZMAT1Q5H9K5 638 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PRR23CQ6ZRP0 262 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 RRM2BQ7LG56 351 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SLC46A3Q7Z3Q1 461 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 HJURPQ8NCD3 748 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 NFKBIDQ8NI38 313 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 GRPEL2Q8TAA5 225 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 DPF3Q92784 378 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 FRMD6Q96NE9 622 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 FAM129BQ96TA1 746 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 ZNF717Q9BY31 904 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 SPIN1Q9Y657 262 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
UBE2D3-210ENST00000453744 LY75O60449 1722 aa13.4□□□□□ -0.27
UBE2D3-210ENST00000453744 ANKDD1BA6NHY2 528 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 OR2AG2A6NM03 316 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 HOXC11O43248 304 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 OR56A5P0C7T3 313 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 MYL12AP19105 171 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 GRK5P34947 590 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 PIK3CBP42338 1070 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 GBX1Q14549 363 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 FBXO43Q4G163 708 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 LAX1Q8IWV1 398 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 MIEF1Q9NQG6 463 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 MBLAC1A4D2B0 266 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 J3KTA2 159 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CLDN11O75508 207 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 PDE9AO76083 593 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 ETFAP13804 333 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 BTBD16Q32M84 506 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CEP78Q5JTW2 689 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CDH24Q86UP0 819 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 TIGD4Q8IY51 512 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 NAGSQ8N159 534 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CSGALNACT1Q8TDX6 532 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 JPH3Q8WXH2 748 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 NACC2Q96BF6 587 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 SUSD3Q96L08 255 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 TMEM245Q9H330 911 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 ZNF222Q9UK12 451 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 TAPBPO15533 448 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 WBP4O75554 376 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 GJB5O95377 273 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 IGLV3-25P01717 112 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CD6P30203 668 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 BBS7Q8IWZ6 715 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 DNAJC22Q8N4W6 341 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 C2orf73Q8N5S3 287 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 OR7G1Q8NGA0 311 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 FNIP2Q9P278 1114 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 MRPS7Q9Y2R9 242 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 PCDHGA6Q9Y5G7 932 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 FADS2P1A8MWK0 482 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 M0R082 166 aa13.39□□□□□ -0.27
UBE2D3-210ENST00000453744 BTN3A3O00478 584 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms