RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MRPL57Q9BQC6 102 aaKnown RBP17.19■□□□□ 0.34
SQSTM1-204ENST00000453046 MRPL46Q9H2W6 279 aaKnown RBP17.19■□□□□ 0.34
SQSTM1-204ENST00000453046 SLAMF7Q9NQ25 335 aa17.19■□□□□ 0.34
SQSTM1-204ENST00000453046 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
SQSTM1-204ENST00000453046 FLNCQ14315 2725 aa17.19■□□□□ 0.34
SQSTM1-204ENST00000453046 SPENQ96T58 3664 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 ZNF839A8K0R7 811 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 ARHGEF33A8MVX0 844 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 KLHL41O60662 606 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 ALBP02768 609 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 UMODP07911 640 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 GCGRP47871 477 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 CD97P48960 835 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 GYS2P54840 703 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 VWA5B1Q5TIE3 1220 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 JMJD6Q6NYC1 403 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 SUSD1Q6UWL2 747 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 NEK10Q6ZWH5 1172 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 METTL27Q8N6F8 245 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 CCDC63Q8NA47 563 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 ARMC2Q8NEN0 867 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 RHEBL1Q8TAI7 183 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 SCYL1Q96KG9 808 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 SMAD5Q99717 465 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 DPH7Q9BTV6 452 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 CCDC134Q9H6E4 229 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 MRPS30Q9NP92 439 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 SLC22A11Q9NSA0 550 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 ZNF358Q9NW07 568 aa17.18■□□□□ 0.34
SQSTM1-204ENST00000453046 A0A1W2PPV9 198 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 HYKKA2RU49 373 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 FITM1A5D6W6 292 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 BIRC5O15392 142 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ALPPP05187 535 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 TFEBP19484 476 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 HSD17B2P37059 387 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 OR1D4P47884 311 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 GLRBP48167 497 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 GUCY1A3Q02108 690 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ARHGAP19Q14CB8 494 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 NKG7Q16617 165 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 FRMPD2BQ6IN97 320 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 PPP1R32Q7Z5V6 425 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ADAMTSL2Q86TH1 951 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 MYO1HQ8N1T3 1032 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 KIAA1191Q96A73 305 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 NACC2Q96BF6 587 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ZNF285Q96NJ3 590 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ZFYVE21Q9BQ24 234 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 C12orf65Q9H3J6 166 aaKnown RBP17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 WDR54Q9H977 334 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ATP13A2Q9NQ11 1180 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 LUZP4Q9P127 313 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 C5AR2Q9P296 337 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 MAP10Q9P2G4 905 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 COPG2Q9UBF2 871 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 ADAM21Q9UKJ8 722 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 NXT1Q9UKK6 140 aaKnown RBP17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 KLK4Q9Y5K2 254 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 MAU2Q9Y6X3 613 aa17.17■□□□□ 0.34
SQSTM1-204ENST00000453046 RELNP78509 3460 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 CCDC88CQ9P219 2028 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 MYO1CO00159 1063 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ZBTB14O43829 449 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 KERAO60938 352 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 CCNDBP1O95273 360 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 MPC1LP0DKB6 136 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ITGAXP20702 1163 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 MMP11P24347 488 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 PNLIPRP1P54315 467 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 MYBPC3Q14896 1274 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 PDK4Q16654 411 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ZYG11AQ6WRX3 759 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 SHISA6Q6ZSJ9 500 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ISCA2Q86U28 154 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 TRIM42Q8IWZ5 723 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 CKAP2Q8WWK9 683 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 COL26A1Q96A83 441 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 PKP4Q99569 1192 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 PAIP2Q9BPZ3 127 aaKnown RBP17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 SLC26A1Q9H2B4 701 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 SOX17Q9H6I2 414 aaPredicted RBP17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ALG9Q9H6U8 611 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 ZNF304Q9HCX3 659 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 UTP6Q9NYH9 597 aaKnown RBP17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 TAC3Q9UHF0 121 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 COL12A1Q99715 3063 aa17.16■□□□□ 0.34
SQSTM1-204ENST00000453046 RP1L1Q8IWN7 2480 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 LOC105369274A0A096LPK9 316 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 LOC102723532A0A0G2JNH3 316 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 OR2A25A4D2G3 310 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SYCE1LA8MT33 242 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 NRP2O60462 931 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SHOX2O60902 331 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms