RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GPR1P46091 355 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 HNRNPFP52597 415 aaKnown RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 E2F2Q14209 437 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 WDR45BQ5MNZ6 344 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TCEAL6Q6IPX3 200 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 MSANTD1Q6ZTZ1 278 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 CALHM3Q86XJ0 350 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 SYT12Q8IV01 421 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 OR10A6Q8NH74 314 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 C1orf216Q8TAB5 229 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TCEAL3Q969E4 200 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 RAB7BQ96AH8 199 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 MED8Q96G25 268 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 EGLN2Q96KS0 407 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 LINC00615Q96LM1 132 aaPredicted RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 SH3GL1Q99961 368 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 YIPF3Q9GZM5 350 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 GORASP2Q9H8Y8 452 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 PREBQ9HCU5 417 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 ATXN10Q9UBB4 475 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 OAZ3Q9UMX2 235 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 PDLIM1O00151 329 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 LATO43561 262 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 LZTS3O60299 673 aaPredicted RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 RASAL1O95294 804 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 HSD3B1P14060 373 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 HSD3B2P26439 372 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 GZMMP51124 257 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 CCR5P51681 352 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 LIN52Q52LA3 116 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 PYCR3Q53H96 274 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 ATG9BQ674R7 924 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TRIM69Q86WT6 500 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 HORMAD1Q86X24 394 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TRAPPC5Q8IUR0 188 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 ZNF547Q8IVP9 402 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 CFAP206Q8IYR0 622 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 C11orf24Q96F05 449 aaPredicted RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 ITCHQ96J02 903 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 INPP5KQ9BT40 448 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 THUMPD3Q9BV44 507 aaKnown RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 CHID1Q9BWS9 393 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 ANKRD60Q9BZ19 345 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 KAT8Q9H7Z6 458 aaKnown RBP10.32□□□□□ -0.76
PKP4-206ENST00000452162 TRIM39Q9HCM9 518 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 C8orf4Q9NR00 106 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 GPRC5BQ9NZH0 403 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 VPS29Q9UBQ0 182 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 ZNF639Q9UID6 485 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 PCDHB14Q9Y5E9 798 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TMEM131Q92545 1883 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 A0A1W2PPC4 97 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PRMT3O60678 531 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 B3GALT4O96024 378 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 LDLRP01130 860 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 CD27P26842 260 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 C21orf58P58505 322 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 FGL2Q14314 439 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 SF3A2Q15428 464 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 TMTC4Q5T4D3 741 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 ISLR2Q6UXK2 745 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 TNIP2Q8NFZ5 429 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 OR52E4Q8NGH9 312 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 ZNF480Q8WV37 535 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 TFAP2CQ92754 450 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 SEPHS2Q99611 448 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 CENPKQ9BS16 269 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 EBPLQ9BY08 206 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 RMND5AQ9H871 391 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 CARS2Q9HA77 564 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 BRF2Q9HAW0 419 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 FSCN3Q9NQT6 498 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 SEMA4GQ9NTN9 838 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 V9GYQ6 96 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 ASCC3Q8N3C0 2202 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 TDRD6O60522 2096 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 C17orf113A0A1B0GUU1 675 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 IGLON5A6NGN9 336 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 FAM220BPB1ANY3 271 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PLOD2O00469 737 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 SLC31A1O15431 190 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 LRATO95237 230 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 MT-ND1P03886 318 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 ZNF8P17098 575 aaPredicted RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 PRPS1L1P21108 318 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 CDKN2CP42773 168 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PLOD1Q02809 727 aaPredicted RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 APOFQ13790 326 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PGS1Q32NB8 556 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 SLCO4C1Q6ZQN7 724 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 MICU2Q8IYU8 434 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PHACTR4Q8IZ21 702 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 METTL2AQ96IZ6 378 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 ZNF514Q96K75 400 aaPredicted RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 RNF145Q96MT1 663 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 MTERF1Q99551 399 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms