RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 KIAA0408Q6ZU52 694 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 VN1R4Q7Z5H5 301 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 CUZD1Q86UP6 607 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 C17orf64Q86WR6 236 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 HPS6Q86YV9 775 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 ZC3H7AQ8IWR0 971 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 SHISA5Q8N114 240 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 C17orf53Q8N3J3 647 aaPredicted RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 SIRT6Q8N6T7 355 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 GALNT11Q8NCW6 608 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 FBXO36Q8NEA4 188 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 FAM45AQ8TCE6 357 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 SNRNP40Q96DI7 357 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 VPS50Q96JG6 964 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 HIST1H2AHQ96KK5 128 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 TSNARE1Q96NA8 513 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 AGAP4Q96P64 663 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 HIST1H2AJQ99878 128 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 H2AFJQ9BTM1 129 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 RBCK1Q9BYM8 510 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 UNKQ9C0B0 810 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 LHPPQ9H008 270 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 PARVBQ9HBI1 364 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 IKZF3Q9UKT9 509 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 PSAT1Q9Y617 370 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 CACNA1DQ01668 2161 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 CROCCQ5TZA2 2017 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 IGLV3-12A0A075B6K2 115 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 IGHV3-20A0A0C4DH32 117 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 FAM95CA0A1B0GW59 222 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 CCDC188H7C350 402 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 SGK494L7N484 410 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 CDC7O00311 574 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 TXNDC9O14530 226 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 FANCGO15287 622 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 LCMT2O60294 686 aaKnown RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 KLHL41O60662 606 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 RDH16O75452 317 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 KLHL18O94889 574 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 TSPAN12O95859 305 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 HPP00738 406 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 F10P00742 488 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 COX6A1P12074 109 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 GRK3P35626 688 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 SLC26A3P40879 764 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 SOX8P57073 446 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 CSNK1G2P78368 415 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MGAT5Q09328 741 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MINDY4Q4G0A6 757 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 FHL5Q5TD97 284 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 GARNL3Q5VVW2 1013 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 STEAP4Q687X5 459 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 CAPN13Q6MZZ7 669 aaPredicted RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 LCTLQ6UWM7 567 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 LANCL3Q6ZV70 420 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 STRA8Q7Z7C7 330 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 ASPGQ86U10 573 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 SLC26A11Q86WA9 606 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 ZBED8Q8IZ13 594 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 VWA5B2Q8N398 1253 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 DNAJB14Q8TBM8 379 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 BRIX1Q8TDN6 353 aaKnown RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 LRRC39Q96DD0 335 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MVB12AQ96EY5 273 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 PDLIM2Q96JY6 352 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 EGFL8Q99944 293 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 WDR77Q9BQA1 342 aaPredicted RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 TRIM54Q9BYV2 358 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 PCBD2Q9H0N5 130 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 EPS8L2Q9H6S3 715 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 LRRC4CQ9HCJ2 640 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MKKSQ9NPJ1 570 aaPredicted RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 TMEM184CQ9NVA4 438 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 C14orf105Q9NVL8 296 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 PTGFRNQ9P2B2 879 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 MKL2Q9ULH7 1088 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 NTNG1Q9Y2I2 539 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 VWA7Q9Y334 891 aa8.22□□□□□ -1.09
RFX3-209ENST00000451859 COPG1Q9Y678 874 aaKnown RBP8.22□□□□□ -1.09
RFX3-209ENST00000451859 GTF3C1Q12789 2109 aa8.21□□□□□ -1.09
RFX3-209ENST00000451859 MAST4O15021 2626 aa8.21□□□□□ -1.09
RFX3-209ENST00000451859 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.09
RFX3-209ENST00000451859 IGHV1-45A0A0A0MS14 117 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 A1L4Q6 167 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 CLEC18AA5D8T8 446 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 OR2W5A6NFC9 320 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 SLC16A5O15375 505 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 NDUFS4O43181 175 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 OR1F1O43749 312 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 SEMA7AO75326 666 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 CDC123O75794 336 aaPredicted RBP8.21□□□□□ -1.1
RFX3-209ENST00000451859 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.1
RFX3-209ENST00000451859 B3GALT4O96024 378 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 SLC35G6P0C7Q6 338 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 RNF224P0DH78 156 aa8.21□□□□□ -1.1
RFX3-209ENST00000451859 C8orf89P0DMQ9 161 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms