RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
VPS33A-202ENST00000451053 KCNE1BA0A087WTH5 132 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SLCO1B7G3V0H7 640 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SRPX2O60687 465 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TGDSO95455 350 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 FAM107AO95990 144 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 OTCP00480 354 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF28P17035 718 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ARL1P40616 181 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SCTRP47872 440 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SEC24CP53992 1094 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 PKNOX1P55347 436 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 CYP4F2P78329 520 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 HKDC1Q2TB90 917 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ARL13AQ5H913 290 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 WASHC2DQ5SRD0 308 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ADNP2Q6IQ32 1131 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 GRHL2Q6ISB3 625 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TMIGD1Q6UXZ0 262 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 BPHLQ86WA6 291 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TMEM126BQ8IUX1 230 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 LSMEM2Q8N112 164 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 KRT78Q8N1N4 520 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TBC1D19Q8N5T2 526 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF655Q8N720 491 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 GATA6Q92908 595 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 THAP11Q96EK4 314 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 TEFMQ96QE5 360 aaKnown RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SIKE1Q9BRV8 207 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 NTMT1Q9BV86 223 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ASPSCR1Q9BZE9 553 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 SLCO1B3Q9NPD5 702 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 IRAK4Q9NWZ3 460 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 HAO1Q9UJM8 370 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF225Q9UK10 706 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-202ENST00000451053 PCDHGA7Q9Y5G6 932 aa12.44□□□□□ -0.42
VPS33A-202ENST00000451053 KNTC1P50748 2209 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZSCAN9O15535 394 aaPredicted RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF749O43361 778 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ITM2AO43736 263 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 LYPLA1O75608 230 aaPredicted RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 SCRG1O75711 98 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 CLDN9O95484 217 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 CXCR2P25025 360 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 GCGRP47871 477 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 RPL14P50914 215 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ERVPABLB-1P60509 514 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 SNRPNP63162 240 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 LAPTM5Q13571 262 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 PRTGQ2VWP7 1150 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 PAGE2BQ5JRK9 111 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 TCTE1Q5JU00 501 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 LIPJQ5W064 366 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 CES4AQ5XG92 561 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 LETMD1Q6P1Q0 360 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 TLDC1Q6P9B6 456 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 GPRIN3Q6ZVF9 776 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 VN1R5Q7Z5H4 357 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 MILR1Q7Z6M3 343 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 SYVN1Q86TM6 617 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ASPGQ86U10 573 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 CUZD1Q86UP6 607 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZFAND4Q86XD8 727 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 WDR75Q8IWA0 830 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 GPR135Q8IZ08 494 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 OR4F6Q8NGB9 312 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 PIWIL2Q8TC59 973 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 RERGQ96A58 199 aaPredicted RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 TM4SF19Q96DZ7 209 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 FAR2Q96K12 515 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF382Q96SR6 550 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 SORT1Q99523 831 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZPBPQ9BS86 351 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 TRIM55Q9BYV6 548 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ULBP3Q9BZM4 244 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 B3GNT4Q9C0J1 378 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 PITHD1Q9GZP4 211 aaPredicted RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 NT5DC2Q9H857 520 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ENAMQ9NRM1 1142 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 ZFP69BQ9UJL9 534 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 RUVBL1Q9Y265 456 aaKnown RBP12.43□□□□□ -0.42
VPS33A-202ENST00000451053 AP1M2Q9Y6Q5 423 aa12.43□□□□□ -0.42
VPS33A-202ENST00000451053 MDC1Q14676 2089 aaKnown RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 TEX51A0A1B0GUA7 166 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 FITM1A5D6W6 292 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 FFAR3O14843 346 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 GPR42O15529 346 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms