RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 AP2B1P63010 937 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 MEF2AQ02078 507 aaPredicted RBP14.46□□□□□ -0.09
CHD3-205ENST00000449744 C2orf54Q08AI8 447 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 MRPL49Q13405 166 aaKnown RBP14.46□□□□□ -0.09
CHD3-205ENST00000449744 ELOAQ14241 798 aaKnown RBP14.46□□□□□ -0.09
CHD3-205ENST00000449744 ZNF460Q14592 562 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 TLR1Q15399 786 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 ZXDCQ2QGD7 858 aaPredicted RBP14.46□□□□□ -0.09
CHD3-205ENST00000449744 CRB2Q5IJ48 1285 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 SBSNQ6UWP8 590 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 FRA10AC1Q70Z53 315 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 PRSS41Q7RTY9 318 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 KCT2Q8NC54 265 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 SLC5A11Q8WWX8 675 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 ANKRD7Q92527 254 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 OR4K3Q96R72 315 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 GPAMQ9HCL2 828 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 AGPAT4Q9NRZ5 378 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 PTGFRNQ9P2B2 879 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 CTNNAL1Q9UBT7 734 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 C19orf25Q9UFG5 118 aaPredicted RBP14.46□□□□□ -0.09
CHD3-205ENST00000449744 PCDHGA10Q9Y5H3 936 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 CSAG2Q9Y5P2 127 aa14.46□□□□□ -0.09
CHD3-205ENST00000449744 LOC102723996A0A087X1L8 192 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 A0A1W2PQ72 361 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 TRBC2A0A5B9 178 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 DYTNA2CJ06 578 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 CDC7O00311 574 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 NDUFS4O43181 175 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 RAD51CO43502 376 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 JRKO75564 520 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 KLHL18O94889 574 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 CYC1P08574 325 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 ICAM2P13598 275 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 SSTR1P30872 391 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 XCR1P46094 333 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 SNRPNP63162 240 aaKnown RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 ARG2P78540 354 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 RGS1Q08116 209 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 CDC16Q13042 620 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 CBLBQ13191 982 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 ZNF169Q14929 603 aaPredicted RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 NR6A1Q15406 480 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 EIF2S3LQ2VIR3 472 aaKnown RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 CATSPEREQ5SY80 951 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 TMEM205Q6UW68 189 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 RIPOR1Q6ZS17 1223 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 THOC6Q86W42 341 aaKnown RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 OR4K1Q8NGD4 311 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 PRR7Q8TB68 274 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 BRIX1Q8TDN6 353 aaKnown RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 NEIL2Q969S2 332 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 DOCK10Q96BY6 2186 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 TSPAN17Q96FV3 270 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 TSNARE1Q96NA8 513 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 TUBB6Q9BUF5 446 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 SARGQ9BW04 601 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 VN1R1Q9GZP7 353 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 ZNF700Q9H0M5 742 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 RAB17Q9H0T7 212 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 POPDC3Q9HBV1 291 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 UTP11Q9Y3A2 253 aaKnown RBP14.45□□□□□ -0.1
CHD3-205ENST00000449744 NAALAD2Q9Y3Q0 740 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 OARD1Q9Y530 152 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 SLC22A7Q9Y694 548 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 KCNE2Q9Y6J6 123 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHD3-205ENST00000449744 COL12A1Q99715 3063 aa14.45□□□□□ -0.1
CHD3-205ENST00000449744 SHANK1Q9Y566 2161 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 BLACEA4D250 179 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 RDH16O75452 317 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 TSFMP43897 325 aaKnown RBP14.44□□□□□ -0.1
CHD3-205ENST00000449744 HNMTP50135 292 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 ETF1P62495 437 aaKnown RBP14.44□□□□□ -0.1
CHD3-205ENST00000449744 SKP1P63208 163 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 CDKL1Q00532 357 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 POU4F1Q01851 419 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 PWP1Q13610 501 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 HERC3Q15034 1050 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 PCOLCEQ15113 449 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 PPP1R3AQ16821 1122 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 B3GNTL1Q67FW5 361 aaPredicted RBP14.44□□□□□ -0.1
CHD3-205ENST00000449744 NIPAL1Q6NVV3 410 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 TMPRSS11BQ86T26 416 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 ADAMTSL2Q86TH1 951 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 CEP97Q8IW35 865 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 SIRT6Q8N6T7 355 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 CYTH2Q99418 400 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 AIF1LQ9BQI0 150 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 PELI2Q9HAT8 420 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 SMYD2Q9NRG4 433 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 SLC22A14Q9Y267 594 aa14.44□□□□□ -0.1
CHD3-205ENST00000449744 URADA6NGE7 173 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 PIAS1O75925 651 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 IL10P22301 178 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 AHRP35869 848 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 SCTRP47872 440 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 AGTR2P50052 363 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms