RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 FKBP7Q9Y680 259 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TLR4O00206 839 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 AHSA1O95433 338 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 GDI2P50395 445 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SMSP52788 366 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 EMX2Q04743 252 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SCN1BQ07699 218 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 CBX3Q13185 183 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 OLIG2Q13516 323 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ELAVL3Q14576 367 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 DPY19L3Q6ZPD9 716 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 UMODL1-AS1Q8N2C9 162 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 DDX1Q92499 740 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 NSUN3Q9H649 340 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SEC61A2Q9H9S3 476 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PRTFDC1Q9NRG1 225 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SUOXP51687 545 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TXNL4AP83876 142 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 HSF2Q03933 536 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 DAG1Q14118 895 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SYT16Q17RD7 645 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TICAM1Q8IUC6 712 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PEX13Q92968 403 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ASB9Q96DX5 294 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 MMABQ96EY8 250 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 POLR2J2Q9GZM3 115 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 XYLT2Q9H1B5 865 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 MVB12BQ9H7P6 319 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 KAT8Q9H7Z6 458 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 KLHL33A6NCF5 533 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TNFRSF10BO14763 440 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 STK19P49842 368 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ADAM8P78325 824 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 RUNX3Q13761 415 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 DHCR24Q15392 516 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 LIPJQ5W064 366 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 OR4K14Q8NGD5 310 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PKP4Q99569 1192 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PRODH2Q9UF12 536 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ARPC2O15144 300 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 NOS1APO75052 506 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 OPN1SWP03999 348 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ETS2P15036 469 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 GPX6P59796 221 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SOX4Q06945 474 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF763Q0D2J5 394 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 IRF5Q13568 498 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 SLC2A7Q6PXP3 512 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 NRROSQ86YC3 692 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 RAB43Q86YS6 212 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 C9orf43Q8TAL5 461 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TNFAIP8L1Q8WVP5 186 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TRIB3Q96RU7 358 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PCDHAC1Q9H158 963 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PDE7BQ9NP56 450 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 CA14Q9ULX7 337 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 C2orf78A6NCI8 922 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 FAM170BA6NMN3 283 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 E7ENX8 843 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 DUX1O43812 170 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 CBFA2T3O75081 653 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 TIMP1P01033 207 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 CYBAP13498 195 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 ACRV1P26436 265 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 VEGFBP49765 207 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 WDR4P57081 412 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 VSX2P58304 361 aaPredicted RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 UFM1P61960 85 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 IDNKQ5T6J7 187 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 UBE2J2Q8N2K1 259 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 OR10T2Q8NGX3 314 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 C7orf43Q8WVR3 580 aa9.88□□□□□ -0.83
SCN10A-201ENST00000449082 IMP4Q96G21 291 aaKnown RBP9.88□□□□□ -0.83
SCN10A-201ENST00000449082 PRSS51A0A1B0GVH4 220 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 A0A1W2PQU0 124 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF99A8MXY4 864 aaPredicted RBP9.87□□□□□ -0.83
SCN10A-201ENST00000449082 STC2O76061 302 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 OR2T5Q6IEZ7 315 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 ZC3H3Q8IXZ2 948 aaKnown RBP9.87□□□□□ -0.83
SCN10A-201ENST00000449082 OR2T29Q8NH02 315 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 OR8D2Q9GZM6 311 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 MARCH7Q9H992 704 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 TPT1P8Q9HAU6 139 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF670-ZNF695F2Z2N8 137 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 C6orf47O95873 294 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 FHP07954 510 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 G6PDP11413 515 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 DNAJB13P59910 316 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 PTPRCAPQ14761 206 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 KHDC1Q4VXA5 237 aaKnown RBP9.87□□□□□ -0.83
SCN10A-201ENST00000449082 C17orf99Q6UX52 265 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 USP43Q70EL4 1123 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 ASPGQ86U10 573 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 CEP97Q8IW35 865 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 CLIP4Q8N3C7 705 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 IGSF8Q969P0 613 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 OR52B2Q96RD2 323 aa9.87□□□□□ -0.83
SCN10A-201ENST00000449082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms