RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TBX6O95947 436 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-203ENST00000449049 GABRA4P48169 554 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 IDH3AP50213 366 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 CYP4F3Q08477 520 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 DDX39BQ13838 428 aaKnown RBP13.44□□□□□ -0.26
SHMT2-203ENST00000449049 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 ARHGAP22Q7Z5H3 698 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 D2HGDHQ8N465 521 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 RNF175Q8N4F7 328 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 OR2T11Q8NH01 316 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 CREB3L4Q8TEY5 395 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 FCRL4Q96PJ5 515 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 EBF4Q9BQW3 602 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 ACPTQ9BZG2 426 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 PDE7BQ9NP56 450 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 HEATR5BQ9P2D3 2071 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 A0A0G2JND7 137 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 A0A0J9YVX5 310 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 GFRA3O60609 400 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 PRPH2P23942 346 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 MLLT3P42568 568 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 GTF2A1P52655 376 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 RPS13P62277 151 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 HSD11B2P80365 405 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 E2F1Q01094 437 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ZC3H12BQ5HYM0 836 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 Q6ZSR9 355 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TRPV3Q8NET8 790 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 CCT6BQ92526 530 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TM4SF19Q96DZ7 209 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 CCDC74BQ96LY2 380 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 MYCBPQ99417 103 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TMEM120AQ9BXJ8 343 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 SOHLH2Q9NX45 425 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ASCC3Q8N3C0 2202 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 RP1P56715 2156 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TM4SF5O14894 197 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 RGS14O43566 566 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 HCRTR1O43613 425 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 DIAPH2O60879 1101 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 VPS4BO75351 444 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 PRR35P0CG20 571 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 NELFEP18615 380 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 CSRP1P21291 193 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ARFIP2P53365 341 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 CYP4F2P78329 520 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ZFP36L1Q07352 338 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 TRA2AQ13595 282 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 PACS2Q86VP3 889 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 DEFB124Q8NES8 71 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 NT5CQ8TCD5 201 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 MS4A8Q9BY19 250 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 WDR55Q9H6Y2 383 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 RIC8BQ9NVN3 520 aa13.43□□□□□ -0.26
SHMT2-203ENST00000449049 APOBEC2Q9Y235 224 aaKnown RBP13.43□□□□□ -0.26
SHMT2-203ENST00000449049 ATP6AP2A0A1C7CYW4 349 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 A8MU76 341 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 H0YGG7 62 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 LSM1O15116 133 aaKnown RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 MAP3K7O43318 606 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ATP6AP2O75787 350 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 RSL1D1O76021 490 aaKnown RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ETHE1O95571 254 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 MSL3P1P0C860 447 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 EPHA3P29320 983 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SEPHS1P49903 392 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 PDX1P52945 283 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ARF3P61204 181 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 HMGCS1Q01581 520 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.266e-8■■□□□ 12.4
SHMT2-203ENST00000449049 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.267e-8■■□□□ 12.3
SHMT2-203ENST00000449049 ASPGQ86U10 573 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 MCATQ8IVS2 390 aaKnown RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 KIAA2013Q8IYS2 634 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 BCAS4Q8TDM0 211 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SERPINI1Q99574 410 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 CCDC28BQ9BUN5 200 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 PLCL2Q9UPR0 1127 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 LOC105369274A0A096LPK9 316 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 LOC102723532A0A0G2JNH3 316 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 GOLGA8QA0A0J9YX86 632 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 GOLGA8OA6NCC3 632 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 GOLGA8NF8WBI6 632 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 DKK1O94907 266 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 TGFB1P01137 390 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SERPINA6P08185 405 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ARL4DP49703 201 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 INSM1Q01101 510 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 HYAL2Q12891 473 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 TUBB3Q13509 450 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 PWP1Q13610 501 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms