RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KIR2DS3Q14952 304 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PAFAH1B3Q15102 231 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAB35Q15286 201 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAB41Q5JT25 222 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 THOC7Q6I9Y2 204 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FBXL14Q8N1E6 418 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLHC1Q8NHS4 586 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAMTS18Q8TE60 1221 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLF6Q99612 283 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DOHHQ9BU89 302 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DEFB127Q9H1M4 99 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF355PQ9NSJ1 428 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CACNA1AO00555 2505 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TDRD15B5MCY1 1934 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A1B0GTQ1 180 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 HRO43593 1189 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 LIASO43766 372 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SMPD2O60906 423 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CD40LGP29965 261 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 C17orf53Q8N3J3 647 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 LNX2Q8N448 690 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM81AQ8TBF8 368 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ING2Q9H160 280 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC25A18Q9H1K4 315 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 USH1CQ9Y6N9 552 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A0J9YY10 115 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM171A2A8MVW0 826 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHUKO15111 745 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 HMGCLP35914 325 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TBX2Q13207 712 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 EFR3AQ14156 821 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 WSCD2Q2TBF2 565 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZFAND4Q86XD8 727 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CPNE9Q8IYJ1 553 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TBC1D21Q8IYX1 336 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NIPA2Q8N8Q9 360 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CREB3L4Q8TEY5 395 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLHL29Q96CT2 875 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 DPH7Q9BTV6 452 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SEMA4BQ9NPR2 832 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ANKRD10Q9NXR5 420 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPP4R1LQ9P1A2 415 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAST2Q6P0Q8 1798 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LOC102723532A0A0G2JNH3 316 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ANKRD61A6NGH8 418 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR52A4PA6NMU1 304 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 HNRNPRO43390 633 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 AP1G1O43747 822 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPAG7O75391 227 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 HOXD13P35453 343 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAB8AP61006 207 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLDN10P78369 228 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SF3A3Q12874 501 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 BLMHQ13867 455 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PDE7AQ13946 482 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 RASA2Q15283 850 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ASPGQ86U10 573 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM130Q8N3G9 435 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTERQ96BW5 349 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LIN37Q96GY3 246 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CXCL16Q9H2A7 254 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHRAC1Q9NRG0 131 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 WHRNQ9P202 907 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TLCD2A6NGC4 264 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ABLIM1O14639 778 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 AKAP10O43572 662 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCNH1O95259 989 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 BCL10O95999 233 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 KITP10721 976 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PECAM1P16284 738 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 HEPACAMQ14CZ8 416 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LRRC8BQ6P9F7 803 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LDB1Q86U70 411 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NUDT13Q86X67 352 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCNK17Q96T54 332 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LACRTQ9GZZ8 138 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 BRF2Q9HAW0 419 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 FGFR1OP2Q9NVK5 253 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ACTR10Q9NZ32 417 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADGRE2Q9UHX3 823 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM59LQ9UK28 342 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPM1HQ9ULR3 514 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLAGL1Q9UM63 463 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHD8Q9HCK8 2581 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 VGLL3A8MV65 326 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 C1QTNF9BB2RNN3 333 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TPP1O14773 563 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 LY86O95711 162 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CD48P09326 243 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 C1QTNF9P0C862 333 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDKN2BP42772 138 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 AAGABQ6PD74 315 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRELID2Q8N945 189 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SERPINI1Q99574 410 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIM15Q9C019 465 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms