RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ASNA1O43681 348 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 C8GP07360 202 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SP1P08047 785 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 IL1RNP18510 177 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 CAPN3P20807 821 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 JAK1P23458 1154 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 IMPA1P29218 277 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 CDC25BP30305 580 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 MAGEA6P43360 314 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 OR4D2P58180 307 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ABRAXAS2Q15018 415 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 C3AR1Q16581 482 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SFT2D3Q587I9 215 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SPINK14Q6IE38 97 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SLC25A25Q6KCM7 469 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 LANCL3Q6ZV70 420 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 CRLF3Q8IUI8 442 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 LGI4Q8N135 537 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 MCUQ8NE86 351 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ZNF669Q96BR6 464 aaPredicted RBP12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
HMGB3-204ENST00000448905 MTFMTQ96DP5 389 aaKnown RBP12.53□□□□□ -0.4
HMGB3-204ENST00000448905 TM4SF19Q96DZ7 209 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 GPR21Q99679 349 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SLC30A3Q99726 388 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 SYNPO2LQ9H987 977 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 PARVBQ9HBI1 364 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 TRMT6Q9UJA5 497 aaKnown RBP12.53□□□□□ -0.4
HMGB3-204ENST00000448905 NPIPA1Q9UND3 350 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 NAALAD2Q9Y3Q0 740 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
HMGB3-204ENST00000448905 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.4
HMGB3-204ENST00000448905 DOCK10Q96BY6 2186 aa12.52□□□□□ -0.4
HMGB3-204ENST00000448905 PRRG2O14669 202 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 SLC16A5O15375 505 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CLDN14O95500 239 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 KRT14P02533 472 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 STATHP02808 62 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 ABOP16442 354 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 VPS41P49754 854 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CCR8P51685 355 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 RIPPLY3P57055 190 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MPP1Q00013 466 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 PMP22Q01453 160 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 SRSF11Q05519 484 aaKnown RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MAPKAPK3Q16644 382 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 ZNF549Q6P9A3 640 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 AGTRAPQ6RW13 159 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 VN1R4Q7Z5H5 301 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 SLC26A11Q86WA9 606 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MYO1HQ8N1T3 1032 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 KCT2Q8NC54 265 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MDS2Q8NDY4 140 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 ADAMTS18Q8TE60 1221 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 TMEM125Q96AQ2 219 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 SIGLEC12Q96PQ1 595 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MACROD1Q9BQ69 325 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 FAM167BQ9BTA0 163 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 TAS2R13Q9NYV9 303 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 LRFN1Q9P244 771 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 TINAGQ9UJW2 476 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
HMGB3-204ENST00000448905 TEP1Q99973 2627 aaKnown RBP12.52□□□□□ -0.41
HMGB3-204ENST00000448905 ZCWPW2A0A1B0GU75 182 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 FEZF1A0PJY2 475 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 ASPDHA6ND91 283 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 SNRNP200O75643 2136 aaKnown RBP12.51□□□□□ -0.41
HMGB3-204ENST00000448905 HAUS5O94927 633 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 TSPAN12O95859 305 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 CCDC175P0C221 793 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 SLC1A2P43004 574 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 TBPL1P62380 186 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 NAE1Q13564 534 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 PWP1Q13610 501 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 PIWIL4Q7Z3Z4 852 aaKnown RBP12.51□□□□□ -0.41
HMGB3-204ENST00000448905 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.51□□□□□ -0.41
HMGB3-204ENST00000448905 MFSD9Q8NBP5 474 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
HMGB3-204ENST00000448905 ZCCHC10Q8TBK6 192 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms