RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 HCN3Q9P1Z3 774 aa18.65■□□□□ 0.58
VCP-203ENST00000448530 PTGFRNQ9P2B2 879 aa18.65■□□□□ 0.58
VCP-203ENST00000448530 C19orf25Q9UFG5 118 aaPredicted RBP18.65■□□□□ 0.58
VCP-203ENST00000448530 DYRK1BQ9Y463 629 aa18.65■□□□□ 0.58
VCP-203ENST00000448530 PSAT1Q9Y617 370 aa18.65■□□□□ 0.58
VCP-203ENST00000448530 SPENQ96T58 3664 aaKnown RBP18.65■□□□□ 0.58
VCP-203ENST00000448530 LOC102723996A0A087X1L8 192 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 A0A1W2PQ72 361 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 DYTNA2CJ06 578 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 FAM187AA6NFU0 413 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 E7ESA3 106 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 SGK494L7N484 410 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 LCMT2O60294 686 aaKnown RBP18.64■□□□□ 0.57
VCP-203ENST00000448530 KLHL18O94889 574 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 SERPIND1P05546 499 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 CYC1P08574 325 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 ZNF37AP17032 561 aaPredicted RBP18.64■□□□□ 0.57
VCP-203ENST00000448530 TSFMP43897 325 aaKnown RBP18.64■□□□□ 0.57
VCP-203ENST00000448530 XCR1P46094 333 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 SKP1P63208 163 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 ARG2P78540 354 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 B3GNTL1Q67FW5 361 aaPredicted RBP18.64■□□□□ 0.57
VCP-203ENST00000448530 TMEM205Q6UW68 189 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 CAPN12Q6ZSI9 719 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 PRSS41Q7RTY9 318 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 KCT2Q8NC54 265 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 BRIX1Q8TDN6 353 aaKnown RBP18.64■□□□□ 0.57
VCP-203ENST00000448530 SSC4DQ8WTU2 575 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 ANKRD7Q92527 254 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 TUBB6Q9BUF5 446 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 ZNF700Q9H0M5 742 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 TXNDC16Q9P2K2 825 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 SLC22A7Q9Y694 548 aa18.64■□□□□ 0.57
VCP-203ENST00000448530 TRBC2A0A5B9 178 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 TP73O15350 636 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 NDUFS4O43181 175 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 JRKO75564 520 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 MEF2AQ02078 507 aaPredicted RBP18.63■□□□□ 0.57
VCP-203ENST00000448530 HERC3Q15034 1050 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 SBSNQ6UWP8 590 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 FRA10AC1Q70Z53 315 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 SIRT6Q8N6T7 355 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 OR4K1Q8NGD4 311 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 SLC5A11Q8WWX8 675 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 CDKL2Q92772 493 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 PSMG3-AS1Q96PY0 264 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 OR4K3Q96R72 315 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 EGFL8Q99944 293 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 ERP44Q9BS26 406 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 VN1R1Q9GZP7 353 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 DPH5Q9H2P9 285 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 RHOJQ9H4E5 214 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 WHRNQ9P202 907 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 NAALAD2Q9Y3Q0 740 aa18.63■□□□□ 0.57
VCP-203ENST00000448530 SPTAN1Q13813 2472 aaKnown RBP18.63■□□□□ 0.57
VCP-203ENST00000448530 SPTBN1Q01082 2364 aaKnown RBP18.62■□□□□ 0.57
VCP-203ENST00000448530 NPEPPSL1A6NEC2 478 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 ANKUB1A6NFN9 424 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 RDH16O75452 317 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 CBX6O95503 412 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 CASQ1P31415 396 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 TAS2R39P59534 338 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 SNRPNP63162 240 aaKnown RBP18.62■□□□□ 0.57
VCP-203ENST00000448530 MRPS25P82663 173 aaKnown RBP18.62■□□□□ 0.57
VCP-203ENST00000448530 RGS1Q08116 209 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 PWP1Q13610 501 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 PCOLCEQ15113 449 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 ZXDCQ2QGD7 858 aaPredicted RBP18.62■□□□□ 0.57
VCP-203ENST00000448530 NIPAL1Q6NVV3 410 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 TMEM207Q6UWW9 146 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 SPATA4Q8NEY3 305 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 NEIL2Q969S2 332 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 TSNARE1Q96NA8 513 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 CYTH2Q99418 400 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 GPAMQ9HCL2 828 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 SAYSD1Q9NPB0 183 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 CTNNAL1Q9UBT7 734 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 NTNG1Q9Y2I2 539 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 MAST4O15021 2626 aa18.62■□□□□ 0.57
VCP-203ENST00000448530 CDC7O00311 574 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 EIF3HO15372 352 aaKnown RBP eCLIP18.61■□□□□ 0.57
VCP-203ENST00000448530 SEMA7AO75326 666 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 SEC24DO94855 1032 aaPredicted RBP18.61■□□□□ 0.57
VCP-203ENST00000448530 IL10P22301 178 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 AGTR2P50052 363 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 CBLBQ13191 982 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 ZNF460Q14592 562 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 PPP1R3AQ16821 1122 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 CATSPEREQ5SY80 951 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 CPEB2Q7Z5Q1 589 aaKnown RBP18.61■□□□□ 0.57
VCP-203ENST00000448530 ADAMTSL2Q86TH1 951 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 THOC6Q86W42 341 aaKnown RBP18.61■□□□□ 0.57
VCP-203ENST00000448530 OR1N1Q8NGS0 311 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 PSMF1Q92530 271 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 TSPAN17Q96FV3 270 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 AIF1LQ9BQI0 150 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 SARGQ9BW04 601 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 POPDC3Q9HBV1 291 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 TEKT2Q9UIF3 430 aa18.61■□□□□ 0.57
VCP-203ENST00000448530 IKZF3Q9UKT9 509 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms