RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TIAF1O95411 115 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ESRRBO95718 433 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SLC35G6P0C7Q6 338 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SPTBP11277 2137 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SERPINB1P30740 379 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 GCGRP47871 477 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 EMP3P54852 163 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ERVPABLB-1P60509 514 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 GALNT1Q10472 559 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 GPS2Q13227 327 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 PWP1Q13610 501 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 PRTGQ2VWP7 1150 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 MANEAQ5SRI9 462 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 YOD1Q5VVQ6 348 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 LETMD1Q6P1Q0 360 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ZCCHC23Q6ZST2 131 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 GPRIN3Q6ZVF9 776 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 CSNK1A1LQ8N752 337 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 TTC29Q8NA56 475 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 TRPV3Q8NET8 790 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 NT5CQ8TCD5 201 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 REPS1Q96D71 796 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ZNF578Q96N58 590 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 NLNQ9BYT8 704 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 THSD1Q9NS62 852 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SRPK3Q9UPE1 567 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ANKDD1BA6NHY2 528 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 UBFD1O14562 309 aaKnown RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 NDUFS4O43181 175 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ZNF749O43361 778 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 CLEC3AO75596 197 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 OR4F21O95013 312 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SERPINE1P05121 402 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 HBQ1P09105 142 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 CD82P27701 267 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SLC5A2P31639 672 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ARSFP54793 590 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 RCN2Q14257 317 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTSS-202ENST00000448301 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 C10orf62Q5T681 223 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SYVN1Q86TM6 617 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 OR7G3Q8NG95 312 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 PPP1R14CQ8TAE6 165 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 CREB3L4Q8TEY5 395 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 SLC13A3Q8WWT9 602 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 MID1IP1Q9NPA3 183 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 ACSL6Q9UKU0 697 aa13.39□□□□□ -0.27
CTSS-202ENST00000448301 RUVBL1Q9Y265 456 aaKnown RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
CTSS-202ENST00000448301 FER1L5A0AVI2 2057 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 KIAA0754O94854 1291 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 DLGAP3O95886 979 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ENO1P06733 434 aaKnown RBP13.38□□□□□ -0.27
CTSS-202ENST00000448301 SERPINA6P08185 405 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ZNF28P17035 718 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 NR1D1P20393 614 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 GRK2P25098 689 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 CCR10P46092 362 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 CYP4F2P78329 520 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 RGS1Q08116 209 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ZRSR2Q15696 482 aaKnown RBP13.38□□□□□ -0.27
CTSS-202ENST00000448301 CHI3L2Q15782 390 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 FAM214AQ32MH5 1076 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 PRAMEF17Q5VTA0 474 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ADNP2Q6IQ32 1131 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 RHBDD2Q6NTF9 364 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 VN1R5Q7Z5H4 357 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ARHGEF39Q8N4T4 335 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ZNF473Q8WTR7 871 aaKnown RBP13.38□□□□□ -0.27
CTSS-202ENST00000448301 GATA6Q92908 595 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 LRFN5Q96NI6 719 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 NDC1Q9BTX1 674 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ULBP3Q9BZM4 244 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 EML4Q9HC35 981 aaKnown RBP13.38□□□□□ -0.27
CTSS-202ENST00000448301 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
CTSS-202ENST00000448301 ASPMQ8IZT6 3477 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 HYKKA2RU49 373 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.37□□□□□ -0.27
CTSS-202ENST00000448301 STK17BO94768 372 aa13.37□□□□□ -0.27
CTSS-202ENST00000448301 SNUPNO95149 360 aaKnown RBP13.37□□□□□ -0.27
CTSS-202ENST00000448301 TBX6O95947 436 aaPredicted RBP13.37□□□□□ -0.27
CTSS-202ENST00000448301 SERPIND1P05546 499 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms