RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 GFM1Q96RP9 751 aaKnown RBP18.69■□□□□ 0.58
SGCE-207ENST00000447873 CDC6Q99741 560 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 DPYSL5Q9BPU6 564 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 ZFYVE21Q9BQ24 234 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 CCDC28BQ9BUN5 200 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 SOHLH2Q9NX45 425 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 PILRAQ9UKJ1 303 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 SLC12A4Q9UP95 1085 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 PEX11AO75192 247 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 TGFB1P01137 390 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 SERPIND1P05546 499 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 ARL4DP49703 201 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 CLPPQ16740 277 aaPredicted RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 ATP6AP1LQ52LC2 224 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 SPDYAQ5MJ70 313 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 ASCL5Q7RTU5 278 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 TRPV3Q8NET8 790 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 PPP3R2Q96LZ3 170 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 FCRL4Q96PJ5 515 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 NMRK1Q9NWW6 199 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 VPS29Q9UBQ0 182 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 GIMAP2Q9UG22 337 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 CCL27Q9Y4X3 112 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 AP1M2Q9Y6Q5 423 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 A8MU76 341 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 E9PBE3 544 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 LSM1O15116 133 aaKnown RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 KLHL41O60662 606 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 SH3BGRLO75368 114 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 CLEC3AO75596 197 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 RSL1D1O76021 490 aaKnown RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 PTX3P26022 381 aaPredicted RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 NHLH1Q02575 133 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 ZC3H12BQ5HYM0 836 aaKnown RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 RNF44Q7L0R7 432 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 PRSS42Q7Z5A4 293 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 OR4D9Q8NGE8 314 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 RERGQ96A58 199 aaPredicted RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 THAP11Q96EK4 314 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 CMTM7Q96FZ5 175 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 OR2A5Q96R48 311 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 SERPINI1Q99574 410 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 FAM60AQ9NP50 221 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 PDE7BQ9NP56 450 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.68■□□□□ 0.58
SGCE-207ENST00000447873 HEY2Q9UBP5 337 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 PPT2Q9UMR5 302 aa18.68■□□□□ 0.58
SGCE-207ENST00000447873 RIF1Q5UIP0 2472 aaKnown RBP18.67■□□□□ 0.58
SGCE-207ENST00000447873 TOX3O15405 576 aaPredicted RBP18.67■□□□□ 0.58
SGCE-207ENST00000447873 NDUFS4O43181 175 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 LBPP18428 481 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 MLLT3P42568 568 aaPredicted RBP18.67■□□□□ 0.58
SGCE-207ENST00000447873 ACADVLP49748 655 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 SEPHS1P49903 392 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 HSD11B2P80365 405 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 TUBB3Q13509 450 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 AP5B1Q2VPB7 878 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 ZNF574Q6ZN55 896 aaPredicted RBP18.67■□□□□ 0.58
SGCE-207ENST00000447873 TMPRSS9Q7Z410 1059 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 ALYREFQ86V81 257 aaKnown RBP18.67■□□□□ 0.58
SGCE-207ENST00000447873 CREB3L4Q8TEY5 395 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 SLC13A3Q8WWT9 602 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 OR51B5Q9H339 312 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 SYNPO2LQ9H987 977 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 LRTM1Q9HBL6 345 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 C1orf109Q9NX04 203 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 SEMA5BQ9P283 1151 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 TRIM33Q9UPN9 1127 aa18.67■□□□□ 0.58
SGCE-207ENST00000447873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.66■□□□□ 0.58
SGCE-207ENST00000447873 SEC22BO75396 215 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 ETHE1O95571 254 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 STATHP02808 62 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 SPIDRQ14159 915 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 C6orf136Q5SQH8 315 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 FRMPD2BQ6IN97 320 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 CHSY3Q70JA7 882 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 ASPGQ86U10 573 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 KMT5CQ86Y97 462 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 FNDC5Q8NAU1 212 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 MS4A8Q9BY19 250 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 CHRNA10Q9GZZ6 450 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 PDP2Q9P2J9 529 aa18.66■□□□□ 0.58
SGCE-207ENST00000447873 H0YGG7 62 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 NTN3O00634 580 aaPredicted RBP18.65■□□□□ 0.58
SGCE-207ENST00000447873 SERPINA6P08185 405 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 SLC35G6P0C7Q6 338 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 PRR35P0CG20 571 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 NCF2P19878 526 aaPredicted RBP18.65■□□□□ 0.58
SGCE-207ENST00000447873 PRPH2P23942 346 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 ARF3P61204 181 aaPredicted RBP18.65■□□□□ 0.58
SGCE-207ENST00000447873 CUL3Q13618 768 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 DEFB110Q30KQ9 67 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 KHDRBS2Q5VWX1 349 aaKnown RBP18.65■□□□□ 0.58
SGCE-207ENST00000447873 VN1R4Q7Z5H5 301 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 MCATQ8IVS2 390 aaKnown RBP18.65■□□□□ 0.58
SGCE-207ENST00000447873 DNAJC22Q8N4W6 341 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 WDR48Q8TAF3 677 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 CENPKQ9BS16 269 aa18.65■□□□□ 0.58
SGCE-207ENST00000447873 ZNF768Q9H5H4 540 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms