RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SH2D2AQ9NP31 389 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 PSD3Q9NYI0 1048 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 CTSFQ9UBX1 484 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 MTRF1LQ9UGC7 380 aaKnown RBP4.61□□□□□ -1.67
SDCBP-205ENST00000447267 PRSS50Q9UI38 385 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 MFHAS1Q9Y4C4 1052 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 PCDHGB5Q9Y5G0 923 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 WIF1Q9Y5W5 379 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 PTGDR2Q9Y5Y4 395 aa4.61□□□□□ -1.67
SDCBP-205ENST00000447267 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 OR6C74A6NCV1 312 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 OR5K3A6NET4 321 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 I6L893 689 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 SRGAP2O75044 1071 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 OR2B3O76000 313 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 NCR1O76036 304 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 IGSF6O95976 241 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 HLA-DRAP01903 254 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 POLR2CP19387 275 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CDH3P22223 829 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 DPP4P27487 766 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CCR1P32246 355 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CDKN1AP38936 164 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 WNT3AP56704 352 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 VSX2P58304 361 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 RHOAP61586 193 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 OC90Q02509 493 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 DUSP2Q05923 314 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 SRSF4Q08170 494 aaKnown RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ALCAMQ13740 583 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 PDCD1Q15116 288 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CNGA3Q16281 694 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CCDC38Q502W7 563 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ACER2Q5QJU3 275 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ARHGAP11AQ6P4F7 1023 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 WDR59Q6PJI9 974 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CNSTQ6PJW8 725 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 Q6YL49 198 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 TRIM72Q6ZMU5 477 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 COX15Q7KZN9 410 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 DPPA4Q7L190 304 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 TMEM178AQ8NBL3 297 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 TNIP2Q8NFZ5 429 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 KAT2AQ92830 837 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 SCAMP4Q969E2 229 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 DTD2Q96FN9 168 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CAPZA3Q96KX2 299 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ART5Q96L15 291 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CFAP57Q96MR6 1250 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CD180Q99467 661 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 UTP23Q9BRU9 249 aaKnown RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ANGPTL4Q9BY76 406 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 GTPBP4Q9BZE4 634 aaKnown RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 FAM204AQ9H8W3 233 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 CYP3A43Q9HB55 503 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 MRM3Q9HC36 420 aaKnown RBP4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ARFGAP3Q9NP61 516 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 EMC7Q9NPA0 242 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 AGPAT3Q9NRZ7 376 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 TXLNGQ9NUQ3 528 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 DDIT4Q9NX09 232 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 B4GALT7Q9UBV7 327 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 HESX1Q9UBX0 185 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 ZNF212Q9UDV6 495 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 LAMP3Q9UQV4 416 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 WDR37Q9Y2I8 494 aa4.6□□□□□ -1.67
SDCBP-205ENST00000447267 EEF1E1-BLOC1S5C9J1V9 151 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 EEF1E1O43324 174 aaKnown RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 BUB1O43683 1085 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 NEURL1O76050 574 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 FKBP9O95302 570 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 SERPINC1P01008 464 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 CALCAP01258 141 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 LPLP06858 475 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 GAP43P17677 238 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 FDXRP22570 491 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 PIK3CAP42336 1068 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 CLK3P49761 638 aaKnown RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 RAB28P51157 221 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 LOXL3P58215 753 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 NME3Q13232 169 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 GALNT3Q14435 633 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 TIGD2Q4W5G0 525 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 C1orf185Q5T7R7 199 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 RIPPLY2Q5TAB7 128 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 HECTD2Q5U5R9 776 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 BRAT1Q6PJG6 821 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 FIGLAQ6QHK4 219 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 PLXDC2Q6UX71 529 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 FKBP9P1Q75LS8 142 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 ABHD13Q7L211 337 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 ARHGAP12Q8IWW6 846 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 METTL27Q8N6F8 245 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 AOPEPQ8N6M6 819 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 PAF1Q8N7H5 531 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 NECAB1Q8N987 351 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 XXYLT1Q8NBI6 393 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms