RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SLC22A7Q9Y694 548 aa17.68■□□□□ 0.42
CCDC188-202ENST00000444532 SPTA1P02549 2419 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 A0A087X1B8 175 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 CCDC189A1A4V9 331 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 A6NL46 340 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 J3QKU1 62 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 PCDH17O14917 1159 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 H2AFYO75367 372 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 ACSL3O95573 720 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 S100BP04271 92 aaPredicted RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 LTA4HP09960 611 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 CXCR2P25025 360 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 GDF5P43026 501 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 SCTRP47872 440 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 REEP5Q00765 189 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 AIMP2Q13155 320 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 UAP1Q16222 522 aaPredicted RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 C18orf21Q32NC0 220 aaPredicted RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 TMPRSS11BQ86T26 416 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 ISCA2Q86U28 154 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 LAPTM4BQ86VI4 370 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 GALNT16Q8N428 558 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 TEX19Q8NA77 164 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 PDPRQ8NCN5 879 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 ZNF740Q8NDX6 193 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 OR9A4Q8NGU2 314 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 NT5CQ8TCD5 201 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 ANKHQ9HCJ1 492 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 WWOXQ9NZC7 414 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 GPRC5BQ9NZH0 403 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 CD274Q9NZQ7 290 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 FBXL4Q9UKA2 621 aa17.67■□□□□ 0.42
CCDC188-202ENST00000444532 PTBP2Q9UKA9 531 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 TNRC6AQ8NDV7 1962 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 GCN1Q92616 2671 aaKnown RBP17.67■□□□□ 0.42
CCDC188-202ENST00000444532 HMX2A2RU54 273 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 IDSB3KWA1 339 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 TAPBPO15533 448 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 NDUFS4O43181 175 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 PDGFAP04085 211 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 C1GALT1C1LP0DN25 315 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 TFEBP19484 476 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 CASRP41180 1078 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 CSRP3P50461 194 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 EMP2P54851 167 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 RGS1Q08116 209 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 DLG1Q12959 904 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 CDC16Q13042 620 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 HERC3Q15034 1050 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 TUBB8Q3ZCM7 444 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 ATG9BQ674R7 924 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 PRSS58Q8IYP2 241 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 TRPV3Q8NET8 790 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 OR11G2Q8NGC1 345 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 SLC44A1Q8WWI5 657 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 SMAD5Q99717 465 aaKnown RBP17.66■□□□□ 0.42
CCDC188-202ENST00000444532 TMEM79Q9BSE2 394 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 NUDT9Q9BW91 350 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 SPNS1Q9H2V7 528 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 ALG9Q9H6U8 611 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 IGSF5Q9NSI5 407 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 DNAJC11Q9NVH1 559 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 C5AR2Q9P296 337 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 IKBKGQ9Y6K9 419 aa17.66■□□□□ 0.42
CCDC188-202ENST00000444532 STK16O75716 305 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 C2P06681 752 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 IL1RNP18510 177 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 GMPRP36959 345 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 KCNC1P48547 511 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 SNRPNP63162 240 aaKnown RBP17.65■□□□□ 0.42
CCDC188-202ENST00000444532 SKP1P63208 163 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 BMPR2Q13873 1038 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 MYBPC3Q14896 1274 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 FAM83EQ2M2I3 478 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 UBAP2Q5T6F2 1119 aaKnown RBP17.65■□□□□ 0.42
CCDC188-202ENST00000444532 VWA5B1Q5TIE3 1220 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 NIPAL1Q6NVV3 410 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 SLCO4C1Q6ZQN7 724 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 PRSS41Q7RTY9 318 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 ANKRD53Q8N9V6 530 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 ZCCHC10Q8TBK6 192 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 NXNL1Q96CM4 212 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 MOCOSQ96EN8 888 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 PITHD1Q9GZP4 211 aaPredicted RBP17.65■□□□□ 0.42
CCDC188-202ENST00000444532 SNX15Q9NRS6 342 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 NUDT4Q9NZJ9 180 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 NFU1Q9UMS0 254 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 SCN3AQ9NY46 2000 aa17.65■□□□□ 0.42
CCDC188-202ENST00000444532 A0A087WUV0 522 aaPredicted RBP17.64■□□□□ 0.41
CCDC188-202ENST00000444532 URADA6NGE7 173 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 SGK494L7N484 410 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 FFAR3O14843 346 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 CLGNO14967 610 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 GPR42O15529 346 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 KERAO60938 352 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 BMP10O95393 424 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 ALPPP05187 535 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 SERPIND1P05546 499 aa17.64■□□□□ 0.41
CCDC188-202ENST00000444532 HEXBP07686 556 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms