RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TMEM205Q6UW68 189 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ZDHHC24Q6UX98 284 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ZNF572Q7Z3I7 529 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 HPS6Q86YV9 775 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 SPATA6LQ8N4H0 392 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ANKRD53Q8N9V6 530 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 MFSD9Q8NBP5 474 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 MNS1Q8NEH6 495 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ABHD11Q8NFV4 315 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 OR5T3Q8NGG3 340 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 RBCK1Q9BYM8 510 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 VN1R1Q9GZP7 353 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 LHPPQ9H008 270 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 PCBD2Q9H0N5 130 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 RHOJQ9H4E5 214 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 C14orf105Q9NVL8 296 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 G3BP2Q9UN86 482 aaKnown RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 CDC14AQ9UNH5 594 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 MTO1Q9Y2Z2 717 aaKnown RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 DIDO1Q9BTC0 2240 aaKnown RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 TCRBV9S1A1TA0A576 114 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 TXNDC9O14530 226 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SEMA7AO75326 666 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 VPS4BO75351 444 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 FAM155BO75949 473 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 NSA2O95478 260 aaKnown RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ALPPP05187 535 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 HEXBP07686 556 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ANXA5P08758 320 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ENO2P09104 434 aaPredicted RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 PRR35P0CG20 571 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ITGAMP11215 1152 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 CCND1P24385 295 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 HRH2P25021 359 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SOX11P35716 441 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 AP1S2P56377 157 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 HYAL2Q12891 473 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 EFTUD2Q15029 972 aaKnown RBP eCLIP10.28□□□□□ -0.764e-7■■■□□ 19.2
SF3A1-203ENST00000444440 TSNQ15631 228 aaKnown RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 EIF2S3LQ2VIR3 472 aaKnown RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 FBXO48Q5FWF7 155 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 B3GNTL1Q67FW5 361 aaPredicted RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 LINC00696Q6ZRV3 163 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 NDUFAF7Q7L592 441 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ASPGQ86U10 573 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 ATCAYQ86WG3 371 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 FAM26EQ8N5C1 309 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SIRT6Q8N6T7 355 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 CATSPER1Q8NEC5 780 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 OR51Q1Q8NH59 317 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 KIF18AQ8NI77 898 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 FBXO25Q8TCJ0 367 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 BRIX1Q8TDN6 353 aaKnown RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SLC13A3Q8WWT9 602 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 WDR77Q9BQA1 342 aaPredicted RBP10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SARGQ9BW04 601 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 NSMCE4AQ9NXX6 385 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 MAP10Q9P2G4 905 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 MKL2Q9ULH7 1088 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 VPS4AQ9UN37 437 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 NAALAD2Q9Y3Q0 740 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 CRYBG3Q68DQ2 2970 aa10.28□□□□□ -0.76
SF3A1-203ENST00000444440 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 GTF3C1Q12789 2109 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 NSG1A0A0A6YYJ2 146 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 TRBC2A0A5B9 178 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 FAM159BA6NKW6 160 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 H0YIG0 161 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PHGDHO43175 533 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 OR1F1O43749 312 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PRAMEF4O60810 478 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 SEC24DO94855 1032 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 F10P00742 488 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 GSTA2P09210 222 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HIST1H2AGP0C0S8 130 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HIST1H2ADP20671 130 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 GDF5P43026 501 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 XCR1P46094 333 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 AVPR1BP47901 424 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 GLRBP48167 497 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 ST13P50502 369 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PLTPP55058 493 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 OLR1P78380 273 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 REEP5Q00765 189 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 NR6A1Q15406 480 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 OR4D1Q15615 310 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 NDUFA9Q16795 377 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 AGAP7PQ5VUJ5 663 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 PRAMEF9Q5VWM5 478 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 HIST2H2BCQ6DN03 193 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 TMPRSS11BQ86T26 416 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 THOC6Q86W42 341 aaKnown RBP10.27□□□□□ -0.77
SF3A1-203ENST00000444440 IQCKQ8N0W5 287 aa10.27□□□□□ -0.77
SF3A1-203ENST00000444440 ZADH2Q8N4Q0 377 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms