RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SULT1C3Q6IMI6 304 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 PRSS41Q7RTY9 318 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 CCDC91Q7Z6B0 441 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 PDPRQ8NCN5 879 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 OR9A4Q8NGU2 314 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 UHMK1Q8TAS1 419 aaKnown RBP22.44■■□□□ 1.18
VARS-217ENST00000440048 ZCCHC10Q8TBK6 192 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 STAG3L4Q8TBR4 150 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 KCTD4Q8WVF5 259 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 EXT2Q93063 718 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 NXNL1Q96CM4 212 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 FER1L6-AS2Q96M78 137 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 AIF1LQ9BQI0 150 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 CRB3Q9BUF7 120 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 SLC25A23Q9BV35 468 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 SEMA3GQ9NS98 782 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 MAP4K5Q9Y4K4 846 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 PCDHGA9Q9Y5G4 932 aaKnown RBP22.44■■□□□ 1.18
VARS-217ENST00000440048 HS3ST3B1Q9Y662 390 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 A0A087X1B8 175 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 SOCS6O14544 535 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 NSA2O95478 260 aaKnown RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 IGHEP01854 428 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 PDGFAP04085 211 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 INHBAP08476 426 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 SLC35G6P0C7Q6 338 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 HSPA7P48741 367 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 MAT1AQ00266 395 aaKnown RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 IRF9Q00978 393 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 SYT16Q17RD7 645 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 PRICKLE2Q7Z3G6 844 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 LAPTM4BQ86VI4 370 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 CENPLQ8N0S6 344 aaPredicted RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 ESAMQ96AP7 390 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 MOCOSQ96EN8 888 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 ATOH8Q96SQ7 321 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 CNOT10Q9H9A5 744 aaKnown RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 MLXIPLQ9NP71 852 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 MKKSQ9NPJ1 570 aaPredicted RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 ZFP69BQ9UJL9 534 aa22.43■■□□□ 1.18
VARS-217ENST00000440048 PTBP2Q9UKA9 531 aaKnown RBP22.43■■□□□ 1.18
VARS-217ENST00000440048 A0A087WUV0 522 aaPredicted RBP22.42■■□□□ 1.18
VARS-217ENST00000440048 A0A096LPK6 155 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 A6NL46 340 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 H0YIG0 161 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 AGPSO00116 658 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 MASP2O00187 686 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 NDUFS4O43181 175 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 KERAO60938 352 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 IPO13O94829 963 aaKnown RBP22.42■■□□□ 1.18
VARS-217ENST00000440048 ALDOAP04075 364 aaKnown RBP22.42■■□□□ 1.18
VARS-217ENST00000440048 S100BP04271 92 aaPredicted RBP22.42■■□□□ 1.18
VARS-217ENST00000440048 IL1RNP18510 177 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 GNAZP19086 355 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 VARSP26640 1264 aaKnown RBP22.42■■□□□ 1.18
VARS-217ENST00000440048 AHRP35869 848 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 SERPINB8P50452 374 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 CDC16Q13042 620 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 PWP1Q13610 501 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 RBBP7Q16576 425 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 KIRREL2Q6UWL6 708 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 ATG14Q6ZNE5 492 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 SLCO4C1Q6ZQN7 724 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 ASB18Q6ZVZ8 466 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 ANKRD53Q8N9V6 530 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 FDCSPQ8NFU4 85 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 PAFAH2Q99487 392 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 L2HGDHQ9H9P8 463 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 DNAJC11Q9NVH1 559 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 C14orf105Q9NVL8 296 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 NUDT4Q9NZJ9 180 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 C3orf18Q9UK00 162 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 FBXL4Q9UKA2 621 aa22.42■■□□□ 1.18
VARS-217ENST00000440048 DOCK10Q96BY6 2186 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 POC1B-GALNT4F8VUJ3 575 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 SUV39H1O43463 412 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 STK16O75716 305 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 SERPIND1P05546 499 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 C1GALT1C1LP0DN25 315 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 TYK2P29597 1187 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 PGDP52209 483 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 CLEC1AQ8NC01 280 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 NT5CQ8TCD5 201 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 TGIF2Q9GZN2 237 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 ANKHQ9HCJ1 492 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 GPRC5BQ9NZH0 403 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 SLC22A7Q9Y694 548 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 IKBKGQ9Y6K9 419 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 NBASA2RRP1 2371 aa22.41■■□□□ 1.18
VARS-217ENST00000440048 SUPT3HB4E1H0 165 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 SGK494L7N484 410 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 UBXN8O00124 270 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 H2AFYO75367 372 aaKnown RBP22.4■■□□□ 1.18
VARS-217ENST00000440048 SUPT3HO75486 399 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 MSH2P43246 934 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 SERPINB9P50453 376 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 EMP2P54851 167 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 RBBP5Q15291 538 aaKnown RBP22.4■■□□□ 1.18
VARS-217ENST00000440048 FAM83EQ2M2I3 478 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 ATG9BQ674R7 924 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms