RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 C15orf38-AP3S2A0A0A6YYH1 394 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 GLYATL1P3A0A0U1RQE8 302 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 A8MVJ9 347 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 DLX3O60479 287 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 USF1P22415 310 aaPredicted RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 DNASE1L1P49184 302 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 ZNF143P52747 638 aaPredicted RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 EMP3P54852 163 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 DIO3P55073 304 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 OR4D2P58180 307 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 LGALS3BPQ08380 585 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 PTK6Q13882 451 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 BECN1Q14457 450 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 SF1Q15637 639 aaKnown RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 NSDHLQ15738 373 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 ZNF658BQ4V348 819 aaPredicted RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 TMCO3Q6UWJ1 677 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 C22orf34Q6ZV56 151 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 NEIL3Q8TAT5 605 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 TMX3Q96JJ7 454 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 FAM111AQ96PZ2 611 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 TRIB3Q96RU7 358 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 SELENOOQ9BVL4 669 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 DEFB126Q9BYW3 111 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 PIGMQ9H3S5 423 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 HPF1Q9NWY4 346 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 TUBA8Q9NY65 449 aaPredicted RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 CWC15Q9P013 229 aaKnown RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 HERC2O95714 4834 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 CADP27708 2225 aa10.19□□□□□ -0.78
RTN4-211ENST00000438462 DYNC2H1Q8NCM8 4307 aaKnown RBP10.19□□□□□ -0.78
RTN4-211ENST00000438462 EPHB6O15197 1021 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 S1PR4O95977 384 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 TGFAP01135 160 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 MMEP08473 750 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 SLC9A1P19634 815 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 MMP8P22894 467 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 UGT2B10P36537 528 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 XCR1P46094 333 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 TRPC1P48995 793 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 SSR4P51571 173 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 STX17P56962 302 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 DSCR9P59020 149 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 CRYZQ08257 329 aaKnown RBP10.18□□□□□ -0.78
RTN4-211ENST00000438462 P3H1Q32P28 736 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 RNF187Q5TA31 235 aaPredicted RBP10.18□□□□□ -0.78
RTN4-211ENST00000438462 LRRC8BQ6P9F7 803 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 POLNQ7Z5Q5 900 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 TBC1D21Q8IYX1 336 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 CSNK1A1LQ8N752 337 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 CSPG4P5Q96PW8 444 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 BTBD9Q96Q07 612 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 PEBP4Q96S96 227 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 TMEM204Q9BSN7 226 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 ZNF703Q9H7S9 590 aaPredicted RBP10.18□□□□□ -0.78
RTN4-211ENST00000438462 SYNPO2LQ9H987 977 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 SEMA4BQ9NPR2 832 aaPredicted RBP10.18□□□□□ -0.78
RTN4-211ENST00000438462 RBM22Q9NW64 420 aaKnown RBP eCLIP10.18□□□□□ -0.78
RTN4-211ENST00000438462 POLG2Q9UHN1 485 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 PACSIN3Q9UKS6 424 aa10.18□□□□□ -0.78
RTN4-211ENST00000438462 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 H0YGG7 62 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 KLF4O43474 513 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 CDC123O75794 336 aaPredicted RBP10.17□□□□□ -0.78
RTN4-211ENST00000438462 FMO4P31512 558 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 CD79BP40259 229 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 ZNF165P49910 485 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 HILS1P60008 231 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 ARF3P61204 181 aaPredicted RBP10.17□□□□□ -0.78
RTN4-211ENST00000438462 SNRPNP63162 240 aaKnown RBP10.17□□□□□ -0.78
RTN4-211ENST00000438462 LRRC63Q05C16 580 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 GALNT2Q10471 571 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 NRF1Q16656 503 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 FAM47EQ6ZV65 393 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 ZNF525Q8N782 197 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 DTX3LQ8TDB6 740 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 ZNF418Q8TF45 676 aaPredicted RBP10.17□□□□□ -0.78
RTN4-211ENST00000438462 FBXW5Q969U6 566 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 ZUFSPQ96AP4 578 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 SLC22A18Q96BI1 424 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 PLPPR2Q96GM1 343 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 RBCK1Q9BYM8 510 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 PRDM14Q9GZV8 571 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 VPS16Q9H269 839 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 METTL17Q9H7H0 456 aaPredicted RBP10.17□□□□□ -0.78
RTN4-211ENST00000438462 HCN3Q9P1Z3 774 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 CAMK2AQ9UQM7 478 aa10.17□□□□□ -0.78
RTN4-211ENST00000438462 LRRC14BA6NHZ5 514 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 CDC7O00311 574 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 CNR1P21554 472 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 PSMB5P28074 263 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 HMGCLP35914 325 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 LIMS1P48059 325 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 BPIFB4P59827 614 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 RHAGQ02094 409 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 FOXL1Q12952 345 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 RPA4Q13156 261 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 PDK1Q15118 436 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms