RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TTI1O43156 1089 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 KIF5CO60282 957 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 AVILO75366 819 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 NSA2O95478 260 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 KRT14P02533 472 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 STATHP02808 62 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 HIST1H2AGP0C0S8 130 aaPredicted RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 ITGAMP11215 1152 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 ESRRAP11474 423 aaPredicted RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 MLNP12872 115 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 IL1RNP18510 177 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 HIST1H2ADP20671 130 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CCND1P24385 295 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CXCR5P32302 372 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 SLC1A2P43004 574 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 XCR1P46094 333 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CLCN7P51798 805 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 TBPL1P62380 186 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 YBX1P67809 324 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 OC90Q02509 493 aaPredicted RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 TAP2Q03519 686 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 ACTN3Q08043 901 aaPredicted RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 CTBP1Q13363 440 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 KCNJ11Q14654 390 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 SIX1Q15475 284 aaPredicted RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 EXT1Q16394 746 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 SYT16Q17RD7 645 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 ZNF425Q6IV72 752 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CENPUQ71F23 418 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 PIWIL4Q7Z3Z4 852 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 CPEB2Q7Z5Q1 589 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 TICAM1Q8IUC6 712 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 DENND6AQ8IWF6 608 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CPNE9Q8IYJ1 553 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 MYO1HQ8N1T3 1032 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 SLC5A8Q8N695 610 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 FAM98AQ8NCA5 519 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 DNAJB8Q8NHS0 232 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 ASB11Q8WXH4 323 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 MAGOHBQ96A72 148 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 HIST1H2AHQ96KK5 128 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 ZNF354BQ96LW1 612 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 PRAP1Q96NZ9 151 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 GPR21Q99679 349 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 HIST1H2AJQ99878 128 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 UTP23Q9BRU9 249 aaKnown RBP7.34□□□□□ -1.23
VPS50-203ENST00000436177 H2AFJQ9BTM1 129 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 TRIM54Q9BYV2 358 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 VN1R1Q9GZP7 353 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 KCNK13Q9HB14 408 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 CHST11Q9NPF2 352 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 STMN3Q9NZ72 180 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 FBXO5Q9UKT4 447 aa7.34□□□□□ -1.23
VPS50-203ENST00000436177 PCM1Q15154 2024 aa7.34□□□□□ -1.24
VPS50-203ENST00000436177 CACNA1DQ01668 2161 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SNRNP200O75643 2136 aaKnown RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 TCRBV7S3A2A0A539 114 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 FOXS1O43638 330 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SLC19A2O60779 497 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SERPIND1P05546 499 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 C8GP07360 202 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 CELA2AP08217 269 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 COX6B1P14854 86 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 JAK1P23458 1154 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ELAVL4P26378 380 aaKnown RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 IMPA1P29218 277 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 EEF1DP29692 281 aaKnown RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 SKIV2L2P42285 1042 aaKnown RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 MAGEA6P43360 314 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SMSP52788 366 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SP140Q13342 867 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ART3Q13508 389 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ABRAXAS2Q15018 415 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 HERC3Q15034 1050 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 PCOLCEQ15113 449 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 NSDHLQ15738 373 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ZNF766Q5HY98 468 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ACER2Q5QJU3 275 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 PLAG1Q6DJT9 500 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 NIPAL1Q6NVV3 410 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 TMEM205Q6UW68 189 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 LANCL3Q6ZV70 420 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 GDF7Q7Z4P5 450 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ASPGQ86U10 573 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 MCEMP1Q8IX19 187 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 TMEM178AQ8NBL3 297 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS50-203ENST00000436177 OR51Q1Q8NH59 317 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 GIMAP7Q8NHV1 300 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 CD200R1Q8TD46 325 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 GRK7Q8WTQ7 553 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 SLC13A3Q8WWT9 602 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 PSMF1Q92530 271 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 RELTQ969Z4 430 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 CCDC138Q96M89 665 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 TAAR6Q96RI8 345 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 LPAR4Q99677 370 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 HAUS8Q9BT25 410 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms