RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 PCOLCEQ15113 449 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 ASPGQ86U10 573 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 PDSS2Q86YH6 399 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 ATL1Q8WXF7 558 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 MOCOSQ96EN8 888 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 VN1R1Q9GZP7 353 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 EPS8L2Q9H6S3 715 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 LRRC4CQ9HCJ2 640 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 SLC22A7Q9Y694 548 aa16.91■□□□□ 0.3
CPNE1-213ENST00000434795 OR2W5A6NFC9 320 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 CDC7O00311 574 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 CELA2AP08217 269 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ICAM2P13598 275 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 IL1RNP18510 177 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 GRK3P35626 688 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 TSFMP43897 325 aaKnown RBP16.9■□□□□ 0.3
CPNE1-213ENST00000434795 MEF2AQ02078 507 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ZNF169Q14929 603 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-213ENST00000434795 TLR1Q15399 786 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 PPP1R3AQ16821 1122 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 CATSPEREQ5SY80 951 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 RIPOR1Q6ZS17 1223 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 AFAP1L2Q8N4X5 818 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ZNF740Q8NDX6 193 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 BRIX1Q8TDN6 353 aaKnown RBP16.9■□□□□ 0.3
CPNE1-213ENST00000434795 HAS2Q92819 552 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ERP44Q9BS26 406 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ANKHQ9HCJ1 492 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 SMYD2Q9NRG4 433 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 PLA2G3Q9NZ20 509 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 ZFATQ9P243 1243 aa16.9■□□□□ 0.3
CPNE1-213ENST00000434795 WIPF3A6NGB9 483 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 OR1F1O43749 312 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 DNAJB6O75190 326 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 C8orf89P0DMQ9 161 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 ZNF37AP17032 561 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-213ENST00000434795 SAT1P21673 171 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 PWP1Q13610 501 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 CSHL1Q14406 222 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 B3GNTL1Q67FW5 361 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-213ENST00000434795 RPUSD3Q6P087 351 aaKnown RBP16.89■□□□□ 0.29
CPNE1-213ENST00000434795 CEP97Q8IW35 865 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 ZBED8Q8IZ13 594 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 NKAPQ8N5F7 415 aaKnown RBP16.89■□□□□ 0.29
CPNE1-213ENST00000434795 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 SSC4DQ8WTU2 575 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 ANKRD49Q8WVL7 239 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 NEIL2Q969S2 332 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 RIC8BQ9NVN3 520 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 HCN3Q9P1Z3 774 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 WHRNQ9P202 907 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 PTGFRNQ9P2B2 879 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 NAALAD2Q9Y3Q0 740 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 POLEQ07864 2286 aa16.89■□□□□ 0.29
CPNE1-213ENST00000434795 SPTBN1Q01082 2364 aaKnown RBP16.88■□□□□ 0.29
CPNE1-213ENST00000434795 FAM95CA0A1B0GW59 222 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 TRBC2A0A5B9 178 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 ANKUB1A6NFN9 424 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 FAM187AA6NFU0 413 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 PIAS1O75925 651 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 WFS1O76024 890 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 CYC1P08574 325 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 RNF224P0DH78 156 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 ITGAMP11215 1152 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 XCR1P46094 333 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 CDC16Q13042 620 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 ZNF460Q14592 562 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 CYS1Q717R9 158 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 CPEB2Q7Z5Q1 589 aaKnown RBP16.88■□□□□ 0.29
CPNE1-213ENST00000434795 THOC6Q86W42 341 aaKnown RBP16.88■□□□□ 0.29
CPNE1-213ENST00000434795 SIRT6Q8N6T7 355 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 PLPP5Q8NEB5 264 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 OR1N1Q8NGS0 311 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 SLC5A11Q8WWX8 675 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 METTL21AQ8WXB1 218 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 TUBB6Q9BUF5 446 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 SPNS1Q9H2V7 528 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 AGPAT4Q9NRZ5 378 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 SLC22A14Q9Y267 594 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 MTO1Q9Y2Z2 717 aaKnown RBP16.88■□□□□ 0.29
CPNE1-213ENST00000434795 NUP210LQ5VU65 1888 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 HIVEP3Q5T1R4 2406 aa16.88■□□□□ 0.29
CPNE1-213ENST00000434795 ICE1Q9Y2F5 2266 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 IGHV3-20A0A0C4DH32 117 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 CTAGE15A4D2H0 777 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 PABPN1LA6NDY0 278 aaKnown RBP16.87■□□□□ 0.29
CPNE1-213ENST00000434795 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-213ENST00000434795 NDC80O14777 642 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 WISP3O95389 354 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-213ENST00000434795 SSTR1P30872 391 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 SCTRP47872 440 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 CDKL1Q00532 357 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 NXPE4Q6UWF7 544 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
CPNE1-213ENST00000434795 CTAGE6Q86UF2 777 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms