RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TBC1D31Q96DN5 1066 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 BTBD9Q96Q07 612 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 NUDT16L1Q9BRJ7 211 aaKnown RBP2.7□□□□□ -1.98
CLK1-204ENST00000432425 CHCHD5Q9BSY4 110 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 GNB4Q9HAV0 340 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 GPR83Q9NYM4 423 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 BAIAP2L1Q9UHR4 511 aa2.7□□□□□ -1.98
CLK1-204ENST00000432425 ERICH4A6NGS2 130 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TSPY2A6NKD2 308 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 NPIPB9F8W1W9 429 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 AP5Z1O43299 807 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TADA2AO75478 443 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ATP6AP2O75787 350 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 GSRP00390 522 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 HOXD4P09016 255 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 TSPY3P0CV98 308 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TSPY8P0CW00 308 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ALDH1B1P30837 517 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 MC5RP33032 325 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 PEX19P40855 299 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ZNF131P52739 623 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 LIMK1P53667 647 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 IFI35P80217 286 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 TSPY1Q01534 308 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 CD300CQ08708 224 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ILF2Q12905 390 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 PPP2R5CQ13362 524 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TRA2AQ13595 282 aaKnown RBP eCLIP2.69□□□□□ -1.982e-9■■■■□ 22.8
CLK1-204ENST00000432425 CFAP58Q5T655 872 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 IL17RELQ6ZVW7 336 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TLK2Q86UE8 772 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 KLHL5Q96PQ7 755 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ZNF577Q9BSK1 485 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 DESI2Q9BSY9 194 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 XPO4Q9C0E2 1151 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 SDCBP2Q9H190 292 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 PARLQ9H300 379 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 EGLN3Q9H6Z9 239 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TBC1D13Q9NVG8 400 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 GTSE1Q9NYZ3 720 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 NLGN3Q9NZ94 848 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 HACD3Q9P035 362 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 RABL2BQ9UNT1 228 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TTLL3Q9Y4R7 772 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ATRXP46100 2492 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 CCL24O00175 119 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 PES1O00541 588 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 PSMD10O75832 226 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 BAG3O95817 575 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 AOC1P19801 751 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 SFTPDP35247 375 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 HSD17B3P37058 310 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 TNNT2P45379 298 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 RAB28P51157 221 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 CLCN4P51793 760 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 CLDN15P56746 228 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 RBPJQ06330 500 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ACSM1Q08AH1 577 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 C15orf32Q32M92 178 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 C3P1Q6ZMU1 363 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 PRPF39Q86UA1 669 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 LCA5Q86VQ0 697 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 TCEANCQ8N8B7 351 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ARL10Q8N8L6 244 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 GBP7Q8N8V2 638 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 OR52B6Q8NGF0 335 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 OR4C15Q8NGM1 316 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ANP32BQ92688 251 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 HDAC11Q96DB2 347 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 PGM2Q96G03 612 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 LINC00615Q96LM1 132 aaPredicted RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 ZNF597Q96LX8 424 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 ACTL8Q9H568 366 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 RNF121Q9H920 327 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 XAB2Q9HCS7 855 aaKnown RBP2.69□□□□□ -1.98
CLK1-204ENST00000432425 DNAJC4Q9NNZ3 241 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 SMC3Q9UQE7 1217 aa2.69□□□□□ -1.98
CLK1-204ENST00000432425 FER1L5A0AVI2 2057 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 RALGAPA1Q6GYQ0 2036 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 GTPBP10A4D1E9 387 aaKnown RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 SRRM5B3KS81 715 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 G3V2L1 256 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 SPRY1O43609 319 aaPredicted RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 SNAP91O60641 907 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 CYTIPO60759 359 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 CELF2O95319 508 aaKnown RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 IGKV3-15P01624 115 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 MYOGP15173 224 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 IL4RP24394 825 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 ETV5P41161 510 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 SSR1P43307 286 aaKnown RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 ZFP36L2P47974 494 aaKnown RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 CRY2Q49AN0 593 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 ERMARDQ5T6L9 678 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 SEL1L3Q68CR1 1132 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 RPUSD3Q6P087 351 aaKnown RBP2.68□□□□□ -1.98
CLK1-204ENST00000432425 CYB5D1Q6P9G0 228 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 FAM47EQ6ZV65 393 aa2.68□□□□□ -1.98
CLK1-204ENST00000432425 MFN1Q8IWA4 741 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms