RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 DOLPP1Q86YN1 238 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 ZCCHC10Q8TBK6 192 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 PHF10Q8WUB8 498 aaKnown RBP17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 SDCCAG3Q96C92 435 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 KIFC1Q9BW19 673 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 RBCK1Q9BYM8 510 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 ANKHQ9HCJ1 492 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 SYBUQ9NX95 663 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 DRG1Q9Y295 367 aaKnown RBP17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 NEU2Q9Y3R4 380 aa17.24■□□□□ 0.35
UPK3BP1-201ENST00000428678 E9PLN8 166 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 AP3B1O00203 1094 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 FANCGO15287 622 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 RDH16O75452 317 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 NEURL1O76050 574 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 ZNF24P17028 368 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 RPS15AP62244 130 aaKnown RBP17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 CUL1Q13616 776 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 NSDHLQ15738 373 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 TTLL9Q3SXZ7 439 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 SLC25A25Q6KCM7 469 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 SLC13A5Q86YT5 568 aaPredicted RBP17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 EID3Q8N140 333 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 LPAR4Q99677 370 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 SLC30A3Q99726 388 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 VKORC1Q9BQB6 163 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 ENKD1Q9H0I2 346 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 TMEM184CQ9NVA4 438 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 COQ3Q9NZJ6 369 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 LRFN1Q9P244 771 aa17.23■□□□□ 0.35
UPK3BP1-201ENST00000428678 NDC80O14777 642 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 KIF5CO60282 957 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 SLC25A12O75746 678 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 CDC123O75794 336 aaPredicted RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 OGNP20774 298 aaKnown RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 CLCN7P51798 805 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 USP10Q14694 798 aaKnown RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 TMEM214Q6NUQ4 689 aaKnown RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 SPNS2Q8IVW8 549 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 CHERPQ8IWX8 916 aaKnown RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 LRRC56Q8IYG6 542 aaPredicted RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 FBXO15Q8NCQ5 510 aaPredicted RBP17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 ASB11Q8WXH4 323 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 TSLPQ969D9 159 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 DMRTA2Q96SC8 542 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 CDCP1Q9H5V8 836 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 CAPN6Q9Y6Q1 641 aa17.22■□□□□ 0.35
UPK3BP1-201ENST00000428678 KCNE1BA0A087WTH5 132 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 ADAM10O14672 748 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 DIAPH2O60879 1101 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 HRH2P25021 359 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 IMPA1P29218 277 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 OR4D2P58180 307 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 RHAGQ02094 409 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 RNFT1Q5M7Z0 435 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 ZNF468Q5VIY5 522 aaPredicted RBP17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 KIAA0930Q6ICG6 404 aaPredicted RBP17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 CENPUQ71F23 418 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 PDSS2Q86YH6 399 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 LGI4Q8N135 537 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 TXLNBQ8N3L3 684 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 CPSF7Q8N684 471 aaKnown RBP17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 PRELID2Q8N945 189 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 ACBD4Q8NC06 268 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 KCT2Q8NC54 265 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 CAMKVQ8NCB2 501 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 GIMAP7Q8NHV1 300 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 PEX11GQ96HA9 241 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 CCDC177Q9NQR7 707 aaPredicted RBP17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 SOX13Q9UN79 622 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 VPS9D1Q9Y2B5 631 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 NAALAD2Q9Y3Q0 740 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 ASB1Q9Y576 335 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 AKAP6Q13023 2319 aa17.21■□□□□ 0.35
UPK3BP1-201ENST00000428678 ANKHD1Q8IWZ3 2542 aaKnown RBP17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF860A6NHJ4 632 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 MAGEB17A8MXT2 336 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZBTB14O43829 449 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 NME2P1O60361 137 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 NME2P22392 152 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 PTGER1P34995 402 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 COILP38432 576 aaPredicted RBP17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 SLC26A5P58743 744 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 TBPL1P62380 186 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 GSTA5Q7RTV2 222 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 FGD2Q7Z6J4 655 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 PCGF5Q86SE9 256 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 RPS19BP1Q86WX3 136 aaKnown RBP17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 CILP2Q8IUL8 1156 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 KIF2BQ8N4N8 673 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 PLPP5Q8NEB5 264 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 THAP11Q96EK4 314 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 CCDC138Q96M89 665 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 OLFM1Q99784 485 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 DESI2Q9BSY9 194 aa17.2■□□□□ 0.34
UPK3BP1-201ENST00000428678 INTS10Q9NVR2 710 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms