RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CENPKQ9BS16 269 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NLNQ9BYT8 704 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACPTQ9BZG2 426 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TUBB1Q9H4B7 451 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NT5DC2Q9H857 520 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 FANCEQ9HB96 536 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 FAM60AQ9NP50 221 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 AKAP7Q9P0M2 348 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ADGRE2Q9UHX3 823 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZFP69BQ9UJL9 534 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 PLCL2Q9UPR0 1127 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 PCDHGA1Q9Y5H4 931 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 FRYLO94915 3013 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 COL5A1P20908 1838 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GVINP1Q7Z2Y8 2422 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF292O60281 2723 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 LOC105369274A0A096LPK9 316 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 LOC102723532A0A0G2JNH3 316 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 MAGEB17A8MXT2 336 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM150CB9EJG8 249 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 H0YGG7 62 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC28A1O00337 649 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SAP18O00422 153 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SDHDO14521 159 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 NDUFAB1O14561 156 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC30A4O14863 429 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 P2RX6O15547 441 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 LCMT2O60294 686 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CLEC3AO75596 197 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TGFB1P01137 390 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 FTH1P19P0C7X4 201 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 HSD3B1P14060 373 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ALOX15P16050 662 aaPredicted RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 NELFEP18615 380 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CSRP1P21291 193 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 HSD3B2P26439 372 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 EPHA3P29320 983 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CSTF2P33240 577 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 PI4KAP42356 2102 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 IDH3AP50213 366 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 INHBCP55103 352 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CLDN6P56747 220 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARF3P61204 181 aaPredicted RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 INSM1Q01101 510 aaPredicted RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 RELAQ04206 551 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 RGS1Q08116 209 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TUBB3Q13509 450 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRA2AQ13595 282 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 GALNTL6Q49A17 601 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC9B1Q4ZJI4 515 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ATP6AP1LQ52LC2 224 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 XKR7Q5GH72 579 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TOR1AIP1Q5JTV8 583 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SPDYAQ5MJ70 313 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 HES3Q5TGS1 186 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 VN1R5Q7Z5H4 357 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 VN1R4Q7Z5H5 301 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR4N4Q8N0Y3 316 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF655Q8N720 491 aaPredicted RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CAMKVQ8NCB2 501 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRPV3Q8NET8 790 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR2T11Q8NH01 316 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZCCHC10Q8TBK6 192 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF473Q8WTR7 871 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC13A3Q8WWT9 602 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 KLHL6Q8WZ60 621 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CMTM7Q96FZ5 175 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC41A2Q96JW4 573 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 RILPQ96NA2 401 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR2A5Q96R48 311 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCT8L2Q96SF2 557 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCT7Q99832 543 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 MACROD1Q9BQ69 325 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SARGQ9BW04 601 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM120AQ9BXJ8 343 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 MS4A8Q9BY19 250 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 STRADBQ9C0K7 418 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CHRNA10Q9GZZ6 450 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 RHBGQ9H310 441 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR51B5Q9H339 312 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 WDR55Q9H6Y2 383 aaPredicted RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 SYNPO2LQ9H987 977 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 MEAF6Q9HAF1 191 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 BRF2Q9HAW0 419 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 LRTM1Q9HBL6 345 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 NMRK1Q9NWW6 199 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 KLHL14Q9P2G3 628 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 PDP2Q9P2J9 529 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 GIMAP2Q9UG22 337 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 PILRAQ9UKJ1 303 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TSC22D4Q9Y3Q8 395 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 AP1M2Q9Y6Q5 423 aa7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 TDRD6O60522 2096 aaKnown RBP7.56□□□□□ -1.2
HMGA1P4-201ENST00000428643 CABIN1Q9Y6J0 2220 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 E9PBE3 544 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FOXE1O00358 373 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms