RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 DNAJC22Q8N4W6 341 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ASZ1Q8WWH4 475 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 WDR34Q96EX3 536 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 MRPL17Q9NRX2 175 aaKnown RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 THSD1Q9NS62 852 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 KIF17Q9P2E2 1029 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 B4GALT6Q9UBX8 382 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF282Q9UDV7 671 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 EXO1Q9UQ84 846 aaKnown RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 PCDHGA2Q9Y5H1 932 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 SCN5AQ14524 2016 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 CLCA1A8K7I4 914 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ARHGEF33A8MVX0 844 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 EFCAB9A8MZ26 197 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 E7EQ34 232 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 PRRG1O14668 218 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 MYO1DO94832 1006 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ETHE1O95571 254 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 LCKP06239 509 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 NUDT7P0C024 238 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 LIPAP38571 399 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 MAPK9P45984 424 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 STK19P49842 368 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 HMGA2P52926 109 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 PNLIPRP1P54315 467 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 EEF1A2Q05639 463 aaKnown RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 RBBP4Q09028 425 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 FBXO43Q4G163 708 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF658BQ4V348 819 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 SPIN4Q56A73 249 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 XKR6Q5GH73 641 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 CPTPQ5TA50 214 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 C19orf48Q6RUI8 117 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 GAREM2Q75VX8 874 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 GALNT10Q86SR1 603 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 TMC8Q8IU68 726 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 NPAS3Q8IXF0 933 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 TIFAQ96CG3 184 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 OR4K3Q96R72 315 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 EMILIN2Q9BXX0 1053 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 TMEM38AQ9H6F2 299 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 CPNE5Q9HCH3 593 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 TMEM184CQ9NVA4 438 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 SCHIP1Q9P0W5 487 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-204ENST00000428136 ITGB1BP2Q9UKP3 347 aa7.58□□□□□ -1.2
LRCH3-204ENST00000428136 QSOX1O00391 747 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ADAMDEC1O15204 470 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 LILRB3O75022 631 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CNOT3O75175 753 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CPSF4O95639 269 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 HOXD10P28358 340 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 HLA-FP30511 346 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 RRM2P31350 389 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SLC19A1P41440 591 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 POLR2LP62875 67 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SEMG2Q02383 582 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ACSM2AQ08AH3 577 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 GAB1Q13480 694 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PDE7AQ13946 482 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 EIF4HQ15056 248 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF181Q2M3W8 571 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CATSPEREQ5SY80 951 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 C10orf62Q5T681 223 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ACSM2BQ68CK6 577 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 DPY19L3Q6ZPD9 716 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 NCCRP1Q6ZVX7 275 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SLC46A3Q7Z3Q1 461 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 TRAM1L1Q8N609 369 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 FBXO15Q8NCQ5 510 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 DENND6BQ8NEG7 585 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 VPS37AQ8NEZ2 397 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CHAC2Q8WUX2 184 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 GGHQ92820 318 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 RPL3LQ92901 407 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 MYDGFQ969H8 173 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 MYOCQ99972 504 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 COPS4Q9BT78 406 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ATG10Q9H0Y0 220 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 CFAP97Q9P2B7 532 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 STOX2Q9P2F5 926 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ANKMY1Q9P2S6 941 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 VPS4AQ9UN37 437 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SLC5A10A0PJK1 596 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ARRDC5A6NEK1 342 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SAGE2PA6NJ88 616 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 GRM6O15303 877 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 COQ9O75208 318 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 UPK1BO75841 260 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 PARNO95453 639 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 SRPRAP08240 638 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ANXA8P13928 327 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 POLR2EP19388 210 aaKnown RBP7.57□□□□□ -1.2
LRCH3-204ENST00000428136 ETV6P41212 452 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 FCHO2Q0JRZ9 810 aa7.57□□□□□ -1.2
LRCH3-204ENST00000428136 MICAQ29983 383 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms