RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CATSPEREQ5SY80 951 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 CEP128Q6ZU80 1094 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 VN1R4Q7Z5H5 301 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 TMPRSS11BQ86T26 416 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 AMER3Q8N944 861 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 KCT2Q8NC54 265 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 ABHD11Q8NFV4 315 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 CPT1CQ8TCG5 803 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 FBF1Q8TES7 1133 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 NEIL2Q969S2 332 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 C8orf44Q96CB5 159 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 OR4K3Q96R72 315 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 UNKQ9C0B0 810 aaKnown RBP19.6■□□□□ 0.73
HSPG2-205ENST00000427897 TGIF2Q9GZN2 237 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 DERL2Q9GZP9 239 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 LHPPQ9H008 270 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 ILKAPQ9H0C8 392 aaPredicted RBP19.6■□□□□ 0.73
HSPG2-205ENST00000427897 ZNF552Q9H707 407 aaPredicted RBP19.6■□□□□ 0.73
HSPG2-205ENST00000427897 MTRF1LQ9UGC7 380 aaKnown RBP19.6■□□□□ 0.73
HSPG2-205ENST00000427897 IKZF3Q9UKT9 509 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 PLAAQ9Y263 795 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 MRPS2Q9Y399 296 aaKnown RBP19.6■□□□□ 0.73
HSPG2-205ENST00000427897 PCSK5Q92824 1860 aa19.6■□□□□ 0.73
HSPG2-205ENST00000427897 NUP210LQ5VU65 1888 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 ESYT3A0FGR9 886 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 PCDH17O14917 1159 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 PHGDHO43175 533 aaKnown RBP19.59■□□□□ 0.73
HSPG2-205ENST00000427897 VARSP26640 1264 aaKnown RBP19.59■□□□□ 0.73
HSPG2-205ENST00000427897 RAB10P61026 200 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 ATP6V0D1P61421 351 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 SLMAPQ14BN4 828 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 TRADDQ15628 312 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 PPP1R3AQ16821 1122 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 MINDY4Q4G0A6 757 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 TMEM214Q6NUQ4 689 aaKnown RBP19.59■□□□□ 0.73
HSPG2-205ENST00000427897 GPSM1Q86YR5 675 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 SPATA6LQ8N4H0 392 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 MMGT1Q8N4V1 131 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 OR4K1Q8NGD4 311 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 PNPLA2Q96AD5 504 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 TM4SF19Q96DZ7 209 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 GPR22Q99680 433 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 EPS8L2Q9H6S3 715 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 CNOT10Q9H9A5 744 aaKnown RBP19.59■□□□□ 0.73
HSPG2-205ENST00000427897 LRRC4CQ9HCJ2 640 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 HCN3Q9P1Z3 774 aa19.59■□□□□ 0.73
HSPG2-205ENST00000427897 URADA6NGE7 173 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 SGK494L7N484 410 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 PHBP35232 272 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 EEF1A2Q05639 463 aaKnown RBP19.58■□□□□ 0.72
HSPG2-205ENST00000427897 HERC3Q15034 1050 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 ZXDCQ2QGD7 858 aaPredicted RBP19.58■□□□□ 0.72
HSPG2-205ENST00000427897 GLE1Q53GS7 698 aaKnown RBP19.58■□□□□ 0.72
HSPG2-205ENST00000427897 ATG9BQ674R7 924 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 SLC6A19Q695T7 634 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 NXPE4Q6UWF7 544 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 ZDHHC24Q6UX98 284 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 NDUFAF7Q7L592 441 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 KBTBD2Q8IY47 623 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 TCAIMQ8N3R3 496 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 RBMXL3Q8N7X1 1067 aaKnown RBP19.58■□□□□ 0.72
HSPG2-205ENST00000427897 OR51Q1Q8NH59 317 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 MRRFQ96E11 262 aaKnown RBP19.58■□□□□ 0.72
HSPG2-205ENST00000427897 CAPS2Q9BXY5 557 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 L2HGDHQ9H9P8 463 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 PELI2Q9HAT8 420 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 WWOXQ9NZC7 414 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 CD274Q9NZQ7 290 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 B3GNT3Q9Y2A9 372 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 NAALAD2Q9Y3Q0 740 aa19.58■□□□□ 0.72
HSPG2-205ENST00000427897 BMP10O95393 424 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 GNAZP19086 355 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 XCR1P46094 333 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 NAB1Q13506 487 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 PWP1Q13610 501 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 TGFBIQ15582 683 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 NIPAL1Q6NVV3 410 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 ABHD13Q7L211 337 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 PRSS41Q7RTY9 318 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 TBC1D1Q86TI0 1168 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-205ENST00000427897 ARHGEF39Q8N4T4 335 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 TRPV3Q8NET8 790 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 MCMBPQ9BTE3 642 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 C19orf25Q9UFG5 118 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-205ENST00000427897 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 RNF112Q9ULX5 631 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 SLC22A7Q9Y694 548 aa19.57■□□□□ 0.72
HSPG2-205ENST00000427897 CLGNO14967 610 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 FAM155BO75949 473 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 WFS1O76024 890 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 KLHL18O94889 574 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 C8orf89P0DMQ9 161 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 ICAM2P13598 275 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 GLRBP48167 497 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 AP2B1P63010 937 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 INPP5JQ15735 1006 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-205ENST00000427897 UAP1Q16222 522 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-205ENST00000427897 ZC3H7AQ8IWR0 971 aaKnown RBP19.56■□□□□ 0.72
HSPG2-205ENST00000427897 IQCKQ8N0W5 287 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 ZNF740Q8NDX6 193 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms