RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PROSER1Q86XN7 944 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 PHACTR4Q8IZ21 702 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.52■■□□□ 1.685e-6■■■■■ 56.5
SH3GL3-202ENST00000427482 CPPED1Q9BRF8 314 aaPredicted RBP25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 THUMPD3Q9BV44 507 aaKnown RBP25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 GPR174Q9BXC1 333 aa25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 TRNAU1APQ9NX07 287 aaKnown RBP25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 MRPS17Q9Y2R5 130 aaKnown RBP25.52■■□□□ 1.68
SH3GL3-202ENST00000427482 ANKDD1BA6NHY2 528 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 PRICKLE3O43900 615 aaPredicted RBP25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 PEX1O43933 1283 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 TBX6O95947 436 aaPredicted RBP25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 NCK1P16333 377 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 HRH2P25021 359 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 NDUFS1P28331 727 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 CD6P30203 668 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 CSNK1G2P78368 415 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 DUOXA1Q1HG43 343 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 LRRC36Q1X8D7 754 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 Q7L0L9 218 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 TMEM102Q8N9M5 508 aaPredicted RBP25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 CANT1Q8WVQ1 401 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 MAGEL2Q9UJ55 1249 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 IGKV1-8A0A0C4DH67 115 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 RFXANKO14593 260 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 TRPC1P48995 793 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 SLC30A9Q6PML9 568 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 SLC22A18ASQ8N1D0 253 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 CXorf40BQ96DE9 158 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 GBP5Q96PP8 586 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 EFHD1Q9BUP0 239 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 MS4A8Q9BY19 250 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 LTB4R2Q9NPC1 389 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 CCM2LQ9NUG4 571 aaPredicted RBP25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 ARMC1Q9NVT9 282 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 MCM8Q9UJA3 840 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 BTBD3Q9Y2F9 522 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 DGKBQ9Y6T7 804 aa25.51■■□□□ 1.67
SH3GL3-202ENST00000427482 TCRBV5S2A0A599 114 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 DHRS12A0PJE2 317 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 FEZF1A0PJY2 475 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 KRBA1A5PL33 1030 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 A6NCN8 305 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 GABRR3A8MPY1 467 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 SEMA3DO95025 777 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 LAMP1P11279 417 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 PIM1P11309 404 aaPredicted RBP25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 UBXN2BQ14CS0 331 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 ANKRD26P1Q6NSI1 321 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 TLDC1Q6P9B6 456 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 SLC9B2Q86UD5 537 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 MIEF2Q96C03 454 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 CCDC115Q96NT0 180 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 DUSP26Q9BV47 211 aa25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 ZNF624Q9P2J8 865 aaPredicted RBP25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 EXO1Q9UQ84 846 aaKnown RBP25.5■■□□□ 1.67
SH3GL3-202ENST00000427482 ARHGEF17Q96PE2 2063 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 KLHL18O94889 574 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 GSNP06396 782 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 RPSAP08865 295 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 PEBP1P30086 187 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 NUDT1P36639 197 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 CPTPQ5TA50 214 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 KHDRBS2Q5VWX1 349 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 NRROSQ86YC3 692 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 OR2T12Q8NG77 320 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 OR10A6Q8NH74 314 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 COQ8BQ96D53 544 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 MYNNQ9NPC7 610 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 ATP6V1HQ9UI12 483 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 NUP214P35658 2090 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 GBAP04062 536 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 CAPNS1P04632 268 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 GPIP06744 558 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 SHMT2P34897 504 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 SOX11P35716 441 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 CYP4F2P78329 520 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 DEPDC1Q5TB30 811 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 PDSS2Q86YH6 399 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 ADGRG5Q8IZF4 528 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 DTWD1Q8N5C7 304 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 ZNF548Q8NEK5 533 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 C16orf78Q8WTQ4 265 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 AURKBQ96GD4 344 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 PRPF18Q99633 342 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 RPF2Q9H7B2 306 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 KAT8Q9H7Z6 458 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 MRPS30Q9NP92 439 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 AHSPQ9NZD4 102 aa25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-202ENST00000427482 ZNF217O75362 1048 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 KLK1P06870 262 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 F3P13726 295 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 GGT1P19440 569 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 PSMA4P25789 261 aaKnown RBP25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 STARD6P59095 220 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 ABATP80404 500 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 GRAMD1BQ3KR37 738 aa25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 PUS10Q3MIT2 529 aaKnown RBP25.48■■□□□ 1.67
SH3GL3-202ENST00000427482 SFT2D3Q587I9 215 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms