RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 EYSQ5T1H1 3165 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 PCDH7O60245 1069 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ADAM23O75077 832 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 SCELO95171 688 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 PDHA2P29803 388 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ERVFC1P60507 584 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 FOXM1Q08050 763 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 MACROD1Q9BQ69 325 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 DNAJC11Q9NVH1 559 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 INSL6Q9Y581 213 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 PCDHB1Q9Y5F3 818 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 C5orf58C9J3I9 102 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 AREL1O15033 823 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 LATO43561 262 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 CYP2A7P20853 494 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 GADD45AP24522 165 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 KDELR2P33947 212 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 CRISP3P54108 245 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 RPS13P62277 151 aaKnown RBP12.92□□□□□ -0.34
USP42-203ENST00000426246 HSPB3Q12988 150 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP42-203ENST00000426246 ZNF846Q147U1 533 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 USP45Q70EL2 814 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 NACC2Q96BF6 587 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 ART5Q96L15 291 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 LHX3Q9UBR4 397 aa12.92□□□□□ -0.34
USP42-203ENST00000426246 PCM1Q15154 2024 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 H0YJX3 145 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 TSPAN6O43657 245 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ARHGEF15O94989 841 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 HLA-EP13747 358 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ACRV1P26436 265 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 PSMD8P48556 350 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 CSNK1DP48730 415 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 TGM4P49221 684 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 C2orf80Q0P641 193 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 C8orf82Q6P1X6 216 aaPredicted RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 Q6ZNB5 142 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 Q6ZNX1 250 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 SLC34A3Q8N130 599 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 CAMKK1Q8N5S9 505 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 HJURPQ8NCD3 748 aaPredicted RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 ZNF740Q8NDX6 193 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 NFKBIDQ8NI38 313 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 KLK6Q92876 244 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 TP53INP1Q96A56 240 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 CNPPD1Q9BV87 410 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ATAD3AQ9NVI7 634 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 THG1LQ9NWX6 298 aaKnown RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 CCL26Q9Y258 94 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 H3BM21 787 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 C6orf47O95873 294 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 SLC16A8O95907 504 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 BMP4P12644 408 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 KRT20P35900 424 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 RFX4Q33E94 735 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 CERS6Q6ZMG9 384 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ZNF513Q8N8E2 541 aaPredicted RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 FAM83FQ8NEG4 500 aaPredicted RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 PIH1D2Q8WWB5 315 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 ARSGQ96EG1 525 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 RETREG1Q9H6L5 497 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 DCAF13Q9NV06 445 aaKnown RBP12.91□□□□□ -0.34
USP42-203ENST00000426246 KCTD5Q9NXV2 234 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 SEC16AO15027 2179 aa12.91□□□□□ -0.34
USP42-203ENST00000426246 HIDE1A8MVS5 230 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 ZNF197O14709 1029 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SNPHO15079 494 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 RFPL2O75678 378 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 CD160O95971 181 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 PIM1P11309 404 aaPredicted RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 NSG1P42857 185 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 CAMK2GQ13555 558 aaPredicted RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 SETD9Q8NE22 299 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 ADPRHL2Q9NX46 363 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 DNAJC27Q9NZQ0 273 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 INTS6Q9UL03 887 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 SLC6A14Q9UN76 642 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SAMD4AQ9UPU9 718 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 KLK1P06870 262 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 ISL1P61371 349 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 CAMK1Q14012 370 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 DOC2AQ14183 400 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 WDR36Q8NI36 951 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 PHF10Q8WUB8 498 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms