RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 BIRC7Q96CA5 298 aa25.43■■□□□ 1.66
LDB1-202ENST00000425280 CCM2LQ9NUG4 571 aaPredicted RBP25.43■■□□□ 1.66
LDB1-202ENST00000425280 FAM120CQ9NX05 1096 aaKnown RBP25.43■■□□□ 1.66
LDB1-202ENST00000425280 MAPRE3Q9UPY8 281 aa25.43■■□□□ 1.66
LDB1-202ENST00000425280 IGKV1-8A0A0C4DH67 115 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 TCRBV5S2A0A599 114 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 ANKDD1BA6NHY2 528 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 RFXANKO14593 260 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 PEX1O43933 1283 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 KLHL18O94889 574 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 PIM1P11309 404 aaPredicted RBP25.42■■□□□ 1.66
LDB1-202ENST00000425280 ACTR1BP42025 376 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 ACTR1AP61163 376 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 CSNK1G2P78368 415 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 FZD5Q13467 585 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 DUOXA1Q1HG43 343 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 SFT2D3Q587I9 215 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 PROSER1Q86XN7 944 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 PHACTR4Q8IZ21 702 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 OR10A6Q8NH74 314 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 FAM110BQ8TC76 370 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 AURKBQ96GD4 344 aaPredicted RBP25.42■■□□□ 1.66
LDB1-202ENST00000425280 GBP5Q96PP8 586 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 GPR174Q9BXC1 333 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 PITHD1Q9GZP4 211 aaPredicted RBP25.42■■□□□ 1.66
LDB1-202ENST00000425280 ARMC1Q9NVT9 282 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 EXO1Q9UQ84 846 aaKnown RBP25.42■■□□□ 1.66
LDB1-202ENST00000425280 LRP4O75096 1905 aa25.42■■□□□ 1.66
LDB1-202ENST00000425280 DHRS12A0PJE2 317 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 TOR1BO14657 336 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 YY2O15391 372 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 PRICKLE3O43900 615 aaPredicted RBP25.41■■□□□ 1.66
LDB1-202ENST00000425280 HPCAL1P37235 193 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 RABIFP47224 123 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 TRPC1P48995 793 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 CYP4F2P78329 520 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 CAMKMTQ7Z624 323 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 PDSS2Q86YH6 399 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 SLC22A18ASQ8N1D0 253 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 FRMD1Q8N878 549 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 LRTOMTQ8WZ04 291 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 ZNF624Q9P2J8 865 aaPredicted RBP25.41■■□□□ 1.66
LDB1-202ENST00000425280 OXTRP30559 389 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 GRAMD1BQ3KR37 738 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 CPTPQ5TA50 214 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 SLC9B2Q86UD5 537 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 ADGRG5Q8IZF4 528 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 DTWD1Q8N5C7 304 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 JPH3Q8WXH2 748 aaPredicted RBP25.41■■□□□ 1.66
LDB1-202ENST00000425280 EFHD1Q9BUP0 239 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 DUSP26Q9BV47 211 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 MS4A8Q9BY19 250 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 RPF2Q9H7B2 306 aaKnown RBP25.41■■□□□ 1.66
LDB1-202ENST00000425280 TRNAU1APQ9NX07 287 aaKnown RBP25.41■■□□□ 1.66
LDB1-202ENST00000425280 MAGEL2Q9UJ55 1249 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 AP3M1Q9Y2T2 418 aa25.41■■□□□ 1.66
LDB1-202ENST00000425280 KRBA1A5PL33 1030 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 KLK1P06870 262 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 FOSL2P15408 326 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 PEBP1P30086 187 aaKnown RBP25.4■■□□□ 1.66
LDB1-202ENST00000425280 CD6P30203 668 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 UBXN2BQ14CS0 331 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 GLYATQ6IB77 296 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 NRROSQ86YC3 692 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 OR2T12Q8NG77 320 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 C16orf78Q8WTQ4 265 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 COQ8BQ96D53 544 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 KAT8Q9H7Z6 458 aaKnown RBP25.4■■□□□ 1.66
LDB1-202ENST00000425280 CAAP1Q9H8G2 361 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 MCM8Q9UJA3 840 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 DMTF1Q9Y222 760 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 HEATR5BQ9P2D3 2071 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 A6NCN8 305 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 CAPNS1P04632 268 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 SERPINB1P30740 379 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 KHDRBS2Q5VWX1 349 aaKnown RBP25.4■■□□□ 1.66
LDB1-202ENST00000425280 FAM20CQ8IXL6 584 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 ZNF548Q8NEK5 533 aaPredicted RBP25.4■■□□□ 1.66
LDB1-202ENST00000425280 CCDC115Q96NT0 180 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 SORBS1Q9BX66 1292 aaKnown RBP25.4■■□□□ 1.66
LDB1-202ENST00000425280 SPHK1Q9NYA1 384 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 INVSQ9Y283 1065 aa25.4■■□□□ 1.66
LDB1-202ENST00000425280 PLXND1Q9Y4D7 1925 aa25.39■■□□□ 1.66
LDB1-202ENST00000425280 OR1F1O43749 312 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 KDM1AO60341 852 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 GGT1P19440 569 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 PSMA4P25789 261 aaKnown RBP25.39■■□□□ 1.65
LDB1-202ENST00000425280 NDUFS1P28331 727 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 CYP51A1Q16850 503 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 DEPDC1Q5TB30 811 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 ADCK2Q7Z695 626 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 CLECL1Q8IZS7 167 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 RLN3Q8WXF3 142 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 PANX1Q96RD7 426 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 PRPF18Q99633 342 aaKnown RBP25.39■■□□□ 1.65
LDB1-202ENST00000425280 REEP4Q9H6H4 257 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 MRPS30Q9NP92 439 aaKnown RBP25.39■■□□□ 1.65
LDB1-202ENST00000425280 LTB4R2Q9NPC1 389 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 MYNNQ9NPC7 610 aa25.39■■□□□ 1.65
LDB1-202ENST00000425280 ATP6V1HQ9UI12 483 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms