RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 RAPSNQ13702 412 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 DMC1Q14565 340 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 UGT8Q16880 541 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CCSMST1Q4G0I0 132 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 LDLRAP1Q5SW96 308 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PLEKHS1Q5SXH7 462 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ACSM2BQ68CK6 577 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 THOC6Q86W42 341 aaKnown RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 HORMAD1Q86X24 394 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ASZ1Q8WWH4 475 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 SH3KBP1Q96B97 665 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ELSPBP1Q96BH3 223 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TPD52L3Q96J77 140 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CPEB1Q9BZB8 566 aaKnown RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 TBC1D23Q9NUY8 699 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TMEM9Q9P0T7 183 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 VPS29Q9UBQ0 182 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TDRKHQ9Y2W6 561 aaKnown RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 VPS13AQ96RL7 3174 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 MAGEB17A8MXT2 336 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 GFYI3L273 518 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 J3QRK9 145 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 EIF3FO00303 357 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 INMTO95050 263 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 KAT7O95251 611 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ASGR2P07307 311 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CTSLP07711 333 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 LAMP1P11279 417 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 TMBIM6P55061 237 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 AP1S2P56377 157 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ISL1P61371 349 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 SP140Q13342 867 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 DOC2AQ14183 400 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ZNF234Q14588 700 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 ZDHHC20Q5W0Z9 365 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CPZQ66K79 652 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 LAIR2Q6ISS4 152 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ANGPTL8Q6UXH0 198 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 NANOGNBQ7Z5D8 188 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CYP4Z1Q86W10 505 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PARP8Q8N3A8 854 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 OR52E4Q8NGH9 312 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 TANKQ92844 425 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 FBXL8Q96CD0 374 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 NODALQ96S42 347 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 HEPHQ9BQS7 1158 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 KIF17Q9P2E2 1029 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CD207Q9UJ71 328 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PPIL1Q9Y3C6 166 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 TCF20Q9UGU0 1960 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 TMEM247A6NEH6 219 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PAPLNO95428 1278 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 NTRK1P04629 796 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 EPHX1P07099 455 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.767e-7■■□□□ 13.7
CUX1-205ENST00000425244 ABCB1P08183 1280 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 JUNBP17275 347 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 ARHGDIAP52565 204 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CASP9P55211 416 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 GRSF1Q12849 480 aaKnown RBP eCLIP10.29□□□□□ -0.76
CUX1-205ENST00000425244 GBX1Q14549 363 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 VMACQ2NL98 169 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ZNF691Q5VV52 312 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 OR2T5Q6IEZ7 315 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 GALNT18Q6P9A2 607 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 TTC23LQ6PF05 361 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 SHQ1Q6PI26 577 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 KIAA0907Q7Z7F0 614 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 CHPFQ8IZ52 775 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 OR2T29Q8NH02 315 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 RAB2BQ8WUD1 216 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 TMEM159Q96B96 161 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 MAGED4Q96JG8 741 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 CSF3RQ99062 836 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 FUNDC2Q9BWH2 189 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 SGK2Q9HBY8 427 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 INIPQ9NRY2 104 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 OBP2AQ9NY56 170 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 PDP1Q9P0J1 537 aaPredicted RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 IL36AQ9UHA7 158 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 ITGB1BP2Q9UKP3 347 aa10.29□□□□□ -0.76
CUX1-205ENST00000425244 SAMHD1Q9Y3Z3 626 aaKnown RBP10.29□□□□□ -0.76
CUX1-205ENST00000425244 SH3PXD2BA1X283 911 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 FADS2P1A8MWK0 482 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ANGPTL1O95841 491 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 NUDT7P0C024 238 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 HOXB9P17482 250 aaPredicted RBP10.28□□□□□ -0.76
CUX1-205ENST00000425244 VIPR1P32241 457 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 GSSP48637 474 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 CTSCP53634 463 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 C21orf59P57076 290 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms