RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TIAF1O95411 115 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 ESRRBO95718 433 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 SERPINE1P05121 402 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 BGNP21810 368 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 GSTM2P28161 218 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 SERPINB5P36952 375 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 GCGRP47871 477 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 PRTGQ2VWP7 1150 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 WASHC2DQ5SRD0 308 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 ADNP2Q6IQ32 1131 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 PWWP2BQ6NUJ5 590 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 MED27Q6P2C8 311 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 TLDC1Q6P9B6 456 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 VN1R5Q7Z5H4 357 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 ASPGQ86U10 573 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 GPR135Q8IZ08 494 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 LSMEM2Q8N112 164 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 TTLQ8NG68 377 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 OR7G3Q8NG95 312 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 PPP1R14CQ8TAE6 165 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 SEC16BQ96JE7 1060 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 SLC46A1Q96NT5 459 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 RHBGQ9H310 441 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 MID1IP1Q9NPA3 183 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 ASCL3Q9NQ33 180 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 IRAK4Q9NWZ3 460 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 TSC22D4Q9Y3Q8 395 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 FREM2Q5SZK8 3169 aa16.22■□□□□ 0.19
COL7A1-202ENST00000422991 IGF2RP11717 2491 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 TRABD2BA6NFA1 517 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CDRT15L2A8MXV6 281 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 STATHP02808 62 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 EIF2S1P05198 315 aaKnown RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 ENO1P06733 434 aaKnown RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CHN1P15882 459 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 GRK2P25098 689 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 RBMS1P29558 406 aaKnown RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 SERPINB1P30740 379 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 ARRB2P32121 409 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CYP4F2P78329 520 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 GALNT1Q10472 559 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 GRM7Q14831 915 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 ZRSR2Q15696 482 aaKnown RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CPSF6Q16630 551 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 HKDC1Q2TB90 917 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 TMEM126BQ8IUX1 230 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 ZNF655Q8N720 491 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CAMKVQ8NCB2 501 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 NT5CQ8TCD5 201 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 CREB3L4Q8TEY5 395 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 SLC13A3Q8WWT9 602 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 REPS1Q96D71 796 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 SLC29A3Q9BZD2 475 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 TNFRSF12AQ9NP84 129 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 STARD5Q9NSY2 213 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 FOXJ2Q9P0K8 574 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 RUVBL1Q9Y265 456 aaKnown RBP16.21■□□□□ 0.19
COL7A1-202ENST00000422991 PCDHB3Q9Y5E6 796 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 PCDHGA7Q9Y5G6 932 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 PCDHGA11Q9Y5H2 935 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
COL7A1-202ENST00000422991 TMEM114B3SHH9 223 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 TXNDC9O14530 226 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 FFAR3O14843 346 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 NVLO15381 856 aaKnown RBP16.2■□□□□ 0.18
COL7A1-202ENST00000422991 GPR42O15529 346 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 NDUFS4O43181 175 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 BRINP1O60477 761 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 CLEC3AO75596 197 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 SCRG1O75711 98 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 CHRNGP07510 517 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 SLC35G6P0C7Q6 338 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 PCNAP12004 261 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 NEFHP12036 1026 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 PWP1Q13610 501 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 ARL13AQ5H913 290 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-202ENST00000422991 TMEM164Q5U3C3 297 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 PRAMEF17Q5VTA0 474 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 FAM219BQ5XKK7 198 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 ATG14Q6ZNE5 492 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 ARHGEF39Q8N4T4 335 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 CDYL2Q8N8U2 506 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 TTC29Q8NA56 475 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-202ENST00000422991 TRPV3Q8NET8 790 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 RAB3IL1Q8TBN0 382 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 WDR20Q8TBZ3 569 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 C10orf90Q96M02 699 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 MACROD1Q9BQ69 325 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 NLNQ9BYT8 704 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 SHCBP1LQ9BZQ2 653 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 SRPK3Q9UPE1 567 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 CACNA1BQ00975 2339 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 FER1L5A0AVI2 2057 aa16.2■□□□□ 0.18
COL7A1-202ENST00000422991 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF749O43361 778 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 MED26O95402 600 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 TBX6O95947 436 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-202ENST00000422991 SERPIND1P05546 499 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 CAPN1P07384 714 aa16.19■□□□□ 0.18
COL7A1-202ENST00000422991 SERPINA6P08185 405 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms