RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZNF460Q14592 562 aa8.79□□□□□ -1
NUP50-206ENST00000422489 FASTKD3Q14CZ7 662 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 RBBP5Q15291 538 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 ZXDCQ2QGD7 858 aaPredicted RBP8.79□□□□□ -1
NUP50-206ENST00000422489 C4orf17Q53FE4 359 aa8.79□□□□□ -1
NUP50-206ENST00000422489 B3GNTL1Q67FW5 361 aaPredicted RBP8.79□□□□□ -1
NUP50-206ENST00000422489 STEAP4Q687X5 459 aa8.79□□□□□ -1
NUP50-206ENST00000422489 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
NUP50-206ENST00000422489 TMEM214Q6NUQ4 689 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 IGFL2Q6UWQ7 119 aa8.79□□□□□ -1
NUP50-206ENST00000422489 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
NUP50-206ENST00000422489 CPEB2Q7Z5Q1 589 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 GALNT7Q86SF2 657 aa8.79□□□□□ -1
NUP50-206ENST00000422489 ARHGEF39Q8N4T4 335 aa8.79□□□□□ -1
NUP50-206ENST00000422489 BBOF1Q8ND07 529 aa8.79□□□□□ -1
NUP50-206ENST00000422489 OR56A3Q8NH54 315 aa8.79□□□□□ -1
NUP50-206ENST00000422489 GRHL3Q8TE85 626 aa8.79□□□□□ -1
NUP50-206ENST00000422489 SSC4DQ8WTU2 575 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PYROXD1Q8WU10 500 aa8.79□□□□□ -1
NUP50-206ENST00000422489 SLC5A11Q8WWX8 675 aa8.79□□□□□ -1
NUP50-206ENST00000422489 FBXL8Q96CD0 374 aa8.79□□□□□ -1
NUP50-206ENST00000422489 TM4SF19Q96DZ7 209 aa8.79□□□□□ -1
NUP50-206ENST00000422489 MOCOSQ96EN8 888 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PEX11GQ96HA9 241 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PDLIM5Q96HC4 596 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 TSNARE1Q96NA8 513 aa8.79□□□□□ -1
NUP50-206ENST00000422489 WDR83Q9BRX9 315 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 ZNF700Q9H0M5 742 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
NUP50-206ENST00000422489 SAYSD1Q9NPB0 183 aa8.79□□□□□ -1
NUP50-206ENST00000422489 RIC8BQ9NVN3 520 aa8.79□□□□□ -1
NUP50-206ENST00000422489 STMN3Q9NZ72 180 aa8.79□□□□□ -1
NUP50-206ENST00000422489 CTNNAL1Q9UBT7 734 aa8.79□□□□□ -1
NUP50-206ENST00000422489 IKZF3Q9UKT9 509 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PSAT1Q9Y617 370 aa8.79□□□□□ -1
NUP50-206ENST00000422489 LOC102723996A0A087X1L8 192 aa8.78□□□□□ -1
NUP50-206ENST00000422489 A1L4Q6 167 aa8.78□□□□□ -1
NUP50-206ENST00000422489 NPEPPSL1A6NEC2 478 aa8.78□□□□□ -1
NUP50-206ENST00000422489 NDC80O14777 642 aa8.78□□□□□ -1
NUP50-206ENST00000422489 PCDH17O14917 1159 aa8.78□□□□□ -1
NUP50-206ENST00000422489 NDUFS4O43181 175 aa8.78□□□□□ -1
NUP50-206ENST00000422489 H2AFYO75367 372 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 RDH16O75452 317 aa8.78□□□□□ -1
NUP50-206ENST00000422489 CDC123O75794 336 aaPredicted RBP8.78□□□□□ -1
NUP50-206ENST00000422489 B3GALT4O96024 378 aa8.78□□□□□ -1
NUP50-206ENST00000422489 ENO2P09104 434 aaPredicted RBP8.78□□□□□ -1
NUP50-206ENST00000422489 SLC35G6P0C7Q6 338 aa8.78□□□□□ -1
NUP50-206ENST00000422489 ITGAMP11215 1152 aa8.78□□□□□ -1
NUP50-206ENST00000422489 CASQ1P31415 396 aa8.78□□□□□ -1
NUP50-206ENST00000422489 TSFMP43897 325 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 PCOLCEQ15113 449 aa8.78□□□□□ -1
NUP50-206ENST00000422489 BTBD16Q32M84 506 aa8.78□□□□□ -1
NUP50-206ENST00000422489 TMEM205Q6UW68 189 aa8.78□□□□□ -1
NUP50-206ENST00000422489 LANCL3Q6ZV70 420 aa8.78□□□□□ -1
NUP50-206ENST00000422489 FRA10AC1Q70Z53 315 aa8.78□□□□□ -1
NUP50-206ENST00000422489 MAATS1Q7Z4T9 603 aa8.78□□□□□ -1
NUP50-206ENST00000422489 THOC6Q86W42 341 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 ZC3HC1Q86WB0 502 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 PDSS2Q86YH6 399 aa8.78□□□□□ -1
NUP50-206ENST00000422489 ZNF740Q8NDX6 193 aa8.78□□□□□ -1
NUP50-206ENST00000422489 ABHD11Q8NFV4 315 aa8.78□□□□□ -1
NUP50-206ENST00000422489 OR4K1Q8NGD4 311 aa8.78□□□□□ -1
NUP50-206ENST00000422489 OR5T3Q8NGG3 340 aa8.78□□□□□ -1
NUP50-206ENST00000422489 PSMF1Q92530 271 aa8.78□□□□□ -1
NUP50-206ENST00000422489 NEIL2Q969S2 332 aa8.78□□□□□ -1
NUP50-206ENST00000422489 VPS39Q96JC1 886 aa8.78□□□□□ -1
NUP50-206ENST00000422489 OR4K3Q96R72 315 aa8.78□□□□□ -1
NUP50-206ENST00000422489 ERP44Q9BS26 406 aa8.78□□□□□ -1
NUP50-206ENST00000422489 TUBB6Q9BUF5 446 aa8.78□□□□□ -1
NUP50-206ENST00000422489 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
NUP50-206ENST00000422489 FAM129AQ9BZQ8 928 aa8.78□□□□□ -1
NUP50-206ENST00000422489 UNKQ9C0B0 810 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 VN1R1Q9GZP7 353 aa8.78□□□□□ -1
NUP50-206ENST00000422489 RHBGQ9H310 441 aa8.78□□□□□ -1
NUP50-206ENST00000422489 MOCS1Q9NZB8 636 aa8.78□□□□□ -1
NUP50-206ENST00000422489 TXNDC16Q9P2K2 825 aa8.78□□□□□ -1
NUP50-206ENST00000422489 C19orf25Q9UFG5 118 aaPredicted RBP8.78□□□□□ -1
NUP50-206ENST00000422489 OSGIN2Q9Y236 505 aa8.78□□□□□ -1
NUP50-206ENST00000422489 SLC22A14Q9Y267 594 aa8.78□□□□□ -1
NUP50-206ENST00000422489 MTO1Q9Y2Z2 717 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 TNRC6AQ8NDV7 1962 aaKnown RBP8.78□□□□□ -1
NUP50-206ENST00000422489 SPTBP11277 2137 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 TRBC2A0A5B9 178 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 FAM187AA6NFU0 413 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 CHST10O43529 356 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 B4GALT2O60909 372 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 DNAJB6O75190 326 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 DDAH2O95865 285 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 WDPCPO95876 746 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 ZNF888P0CJ79 500 aaPredicted RBP8.77□□□□□ -1.01
NUP50-206ENST00000422489 SSTR1P30872 391 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 ST13P50502 369 aaKnown RBP8.77□□□□□ -1.01
NUP50-206ENST00000422489 EFNA3P52797 238 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 RAB8AP61006 207 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 AP2B1P63010 937 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 OLR1P78380 273 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 ZNF33BQ06732 778 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 C2orf54Q08AI8 447 aa8.77□□□□□ -1.01
NUP50-206ENST00000422489 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1.01
NUP50-206ENST00000422489 USP10Q14694 798 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms