RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NSA2O95478 260 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 SP1P08047 785 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 EEF1DP29692 281 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 PTGER1P34995 402 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 SKIV2L2P42285 1042 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 SMSP52788 366 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CASP6P55212 293 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TBPL1P62380 186 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ABATP80404 500 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TIAL1Q01085 375 aaKnown RBP eCLIP7.62□□□□□ -1.19
VIM-202ENST00000421459 RHAGQ02094 409 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ACTN3Q08043 901 aaPredicted RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 PTK6Q13882 451 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ABRAXAS2Q15018 415 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TESK1Q15569 626 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 NSDHLQ15738 373 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 MAPKAPK3Q16644 382 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 NDUFA9Q16795 377 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 MEI1Q5TIA1 1274 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ZNF470Q6ECI4 717 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 MTFR2Q6P444 385 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CASC4Q6P4E1 433 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CTAGE6Q86UF2 777 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CAND1Q86VP6 1230 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 ZNF227Q86WZ6 799 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CEP97Q8IW35 865 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 AGGF1Q8N302 714 aaeCLIP7.62□□□□□ -1.19
VIM-202ENST00000421459 CPSF7Q8N684 471 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 M1APQ8TC57 530 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TM4SF19Q96DZ7 209 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 GPR21Q99679 349 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TRIM51Q9BSJ1 452 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ATG10Q9H0Y0 220 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 FAM114A2Q9NRY5 505 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 LANCL2Q9NS86 450 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TMEM184CQ9NVA4 438 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 TEKT2Q9UIF3 430 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 DHRS7Q9Y394 339 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 NAALAD2Q9Y3Q0 740 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ASB1Q9Y576 335 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 ZCWPW2A0A1B0GU75 182 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ASPDHA6ND91 283 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 TXNDC9O14530 226 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 NDC80O14777 642 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ZBTB14O43829 449 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 KIF5CO60282 957 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 B4GALT2O60909 372 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 FGGP02679 453 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CDH1P12830 882 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CD46P15529 392 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ABOP16442 354 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 OGNP20774 298 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 TPP2P29144 1249 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 CXCR5P32302 372 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 HSD17B2P37059 387 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ADARP55265 1226 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 OR4D2P58180 307 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 SLC26A5P58743 744 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 RPS15AP62244 130 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 BTG2P78543 158 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 MPP1Q00013 466 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 RELAQ04206 551 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 TLE4Q04727 773 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 NAE1Q13564 534 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 DHX34Q14147 1143 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 USP10Q14694 798 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 NAA25Q14CX7 972 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 RPS6KA1Q15418 735 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 MEP1AQ16819 746 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.61□□□□□ -1.194e-13■□□□□ 10.1
VIM-202ENST00000421459 RNF187Q5TA31 235 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 KIAA0930Q6ICG6 404 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 SLC25A25Q6KCM7 469 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 MEX3BQ6ZN04 569 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 CEP128Q6ZU80 1094 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ASPGQ86U10 573 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 GAS2L3Q86XJ1 694 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 RPRMLQ8N4K4 120 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 MARVELD2Q8N4S9 558 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 FBXO15Q8NCQ5 510 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 ZNF740Q8NDX6 193 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CD200R1Q8TD46 325 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 THAP3Q8WTV1 239 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 EEF1AKMT1Q8WVE0 214 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 SLC13A3Q8WWT9 602 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 SREK1Q8WXA9 508 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 ZNF669Q96BR6 464 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 PYCR2Q96C36 320 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 SDCCAG3Q96C92 435 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 DMRTA2Q96SC8 542 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 TCF12Q99081 682 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 NDNQ99608 321 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 UCK2Q9BZX2 261 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ANKHQ9HCJ1 492 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 MMP25Q9NPA2 562 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 CCDC177Q9NQR7 707 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 UTP6Q9NYH9 597 aaKnown RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 LRFN1Q9P244 771 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms