RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ATG10Q9H0Y0 220 aa16.4■□□□□ 0.22
MSH6-203ENST00000420813 STMN3Q9NZ72 180 aa16.4■□□□□ 0.22
MSH6-203ENST00000420813 HCN3Q9P1Z3 774 aa16.4■□□□□ 0.22
MSH6-203ENST00000420813 SH2B3Q9UQQ2 575 aa16.4■□□□□ 0.22
MSH6-203ENST00000420813 SLC22A7Q9Y694 548 aa16.4■□□□□ 0.22
MSH6-203ENST00000420813 PCNX1Q96RV3 2341 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 SGK494L7N484 410 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 PRAMEF2O60811 474 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 SEC24DO94855 1032 aaPredicted RBP16.39■□□□□ 0.21
MSH6-203ENST00000420813 RASAL1O95294 804 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 CDKN2DP55273 166 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 AP1S2P56377 157 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 PHKG1Q16816 387 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 RBM20Q5T481 1227 aaKnown RBP16.39■□□□□ 0.21
MSH6-203ENST00000420813 CAPN13Q6MZZ7 669 aaPredicted RBP16.39■□□□□ 0.21
MSH6-203ENST00000420813 H3F3CQ6NXT2 135 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 LANCL3Q6ZV70 420 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 SLC26A11Q86WA9 606 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 MFSD9Q8NBP5 474 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 KCT2Q8NC54 265 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 ABHD11Q8NFV4 315 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 SLC13A3Q8WWT9 602 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 SLCO2A1Q92959 643 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 MACROD1Q9BQ69 325 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
MSH6-203ENST00000420813 CORO1CQ9ULV4 474 aaPredicted RBP16.39■□□□□ 0.21
MSH6-203ENST00000420813 LRBAP50851 2863 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 FEZF1A0PJY2 475 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 PABPN1LA6NDY0 278 aaKnown RBP16.38■□□□□ 0.21
MSH6-203ENST00000420813 LCMT2O60294 686 aaKnown RBP16.38■□□□□ 0.21
MSH6-203ENST00000420813 ZG16O60844 167 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 TSPAN12O95859 305 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 F10P00742 488 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 AHSGP02765 367 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 CDH1P12830 882 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 NPPBP16860 134 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 IL2P60568 153 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 EXT1Q16394 746 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 BTBD16Q32M84 506 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 DUPD1Q68J44 220 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 ANKRD37Q7Z713 158 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 FJX1Q86VR8 437 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 PDSS2Q86YH6 399 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 TICAM1Q8IUC6 712 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 PLPP5Q8NEB5 264 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 OR4K1Q8NGD4 311 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 OR56A3Q8NH54 315 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 ZCCHC10Q8TBK6 192 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 CERS2Q96G23 380 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 ZNF354BQ96LW1 612 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 OR1F2PQ96R84 312 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
MSH6-203ENST00000420813 GTF3C1Q12789 2109 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 IGHV3-20A0A0C4DH32 117 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 RDH16O75452 317 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 CCR8P51685 355 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 KCNK10P57789 538 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 SKP1P63208 163 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
MSH6-203ENST00000420813 HERC3Q15034 1050 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.37■□□□□ 0.21
MSH6-203ENST00000420813 MSS51Q4VC12 460 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 C1QL3Q5VWW1 255 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 NIPAL1Q6NVV3 410 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 GFRALQ6UXV0 394 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 AFAP1L2Q8N4X5 818 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 M1APQ8TC57 530 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ATL1Q8WXF7 558 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ALKBH8Q96BT7 664 aaKnown RBP16.37■□□□□ 0.21
MSH6-203ENST00000420813 TRIM54Q9BYV2 358 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ARL15Q9NXU5 204 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ENTPD4Q9Y227 616 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 NAALAD2Q9Y3Q0 740 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 ABCA12Q86UK0 2595 aa16.37■□□□□ 0.21
MSH6-203ENST00000420813 TRBC2A0A5B9 178 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 A8MUI8 341 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 BANF1O75531 89 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 ENO2P09104 434 aaPredicted RBP16.36■□□□□ 0.21
MSH6-203ENST00000420813 RHAGQ02094 409 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 PWP1Q13610 501 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 MEP1AQ16819 746 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 ZXDCQ2QGD7 858 aaPredicted RBP16.36■□□□□ 0.21
MSH6-203ENST00000420813 ACER2Q5QJU3 275 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 STRA8Q7Z7C7 330 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 SHISA5Q8N114 240 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 TBC1D19Q8N5T2 526 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 AMER2Q8N7J2 671 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 FBXL8Q96CD0 374 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 SNF8Q96H20 258 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 DDX47Q9H0S4 455 aaKnown RBP16.36■□□□□ 0.21
MSH6-203ENST00000420813 KCNK13Q9HB14 408 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 MMP25Q9NPA2 562 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 LANCL2Q9NS86 450 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 SEC14L3Q9UDX4 400 aa16.36■□□□□ 0.21
MSH6-203ENST00000420813 NCOA6Q14686 2063 aaPredicted RBP16.35■□□□□ 0.21
MSH6-203ENST00000420813 MAGEB17A8MXT2 336 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms