RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRAM1L1Q8N609 369 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR7G3Q8NG95 312 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 H0YIV9 168 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SGTAO43765 313 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLCO2B1O94956 709 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OPN1SWP03999 348 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PORP16435 677 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RPS13P62277 151 aaKnown RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RGNQ15493 299 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ARHGAP15Q53QZ3 475 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF605Q86T29 641 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRAPPC5Q8IUR0 188 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR4K1Q8NGD4 311 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR2A12Q8NGT7 310 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LGALS12Q96DT0 336 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CCM2Q9BSQ5 444 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ARMC7Q9H6L4 198 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AMBNQ9NP70 447 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ACOT13Q9NPJ3 140 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SPATA6Q9NWH7 488 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BTNL2Q9UIR0 455 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NAALAD2Q9Y3Q0 740 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 EFCAB9A8MZ26 197 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KPNA3O00505 521 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ITGA2P17301 1181 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IDUAP35475 653 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NCS1P62166 190 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RELAQ04206 551 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DMC1Q14565 340 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAPK11Q15759 364 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CYP2A13Q16696 494 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SYT16Q17RD7 645 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRIM40Q6P9F5 258 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CYB5D2Q8WUJ1 264 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PPCDCQ96CD2 204 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMPRSS11EQ9UL52 423 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CXCL14O95715 111 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 EPHA2P29317 976 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TIA1P31483 386 aaKnown RBP eCLIP11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KRT20P35900 424 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MLLT10P55197 1068 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CDH12P55289 794 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 WNT3P56703 355 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM115Q12893 351 aaPredicted RBP11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GBX1Q14549 363 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IFI44LQ53G44 452 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GCNT6Q5T4J0 391 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SYT6Q5T7P8 510 aaPredicted RBP11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CHPFQ8IZ52 775 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NAGSQ8N159 534 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PGBD3Q8N328 593 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR10G2Q8NGC3 310 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MCFD2Q8NI22 146 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MYLIPQ8WY64 445 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FCGR1BQ92637 280 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IRF7Q92985 503 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RNF208Q9H0X6 261 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MIEF1Q9NQG6 463 aa11.27□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM202A6NGA9 273 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 GBAP04062 536 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 FUCA1P04066 466 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 IMPDH2P12268 514 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 CD22P20273 847 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 RPL3P39023 403 aaKnown RBP11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 PNLIPRP1P54315 467 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 CBX3Q13185 183 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 ADPRMQ3LIE5 342 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 DEPDC4Q8N2C3 294 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 ZFP90Q8TF47 636 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 GLYATL1Q969I3 302 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 FEVQ99581 238 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 EPYCQ99645 322 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 SLC35A5Q9BS91 424 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 ITPAQ9BY32 194 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 ZNF451Q9Y4E5 1061 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 TRIM17Q9Y577 477 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 SERTM1A2A2V5 107 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 AIREO43918 545 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 KDM1AO60341 852 aa11.27□□□□□ -0.61
CSPG4P3Y-201ENST00000418188 PSIP1O75475 530 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms