RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MZT2BQ6NZ67 158 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ERICH5Q6P6B1 374 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 DOK6Q6PKX4 331 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ALKAL1Q6UXT8 129 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 GPAT4Q86UL3 456 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 OR13C4Q8NGS5 318 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 WDR36Q8NI36 951 aaKnown RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC16A10Q8TF71 515 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 TESCQ96BS2 214 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ULK4Q96C45 1275 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SMOQ99835 787 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 UXTQ9UBK9 157 aaPredicted RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 NDRG2Q9UN36 371 aaKnown RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 CLCA3PQ9Y6N3 262 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ALPK3Q96L96 1907 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 RPS10-NUDT3A0A1W2PQS6 291 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 OTCP00480 354 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 INSRRP14616 1297 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 PSMA1P25786 263 aaKnown RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 CDKN2CP42773 168 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ALDH9A1P49189 494 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 RHAGQ02094 409 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 PCBP2Q15366 365 aaKnown RBP eCLIP7.75□□□□□ -1.172e-30■■■■■ 104.7
HMGXB4-202ENST00000418170 VMACQ2NL98 169 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 WSCD2Q2TBF2 565 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 PLAG1Q6DJT9 500 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 CARNMT1Q8N4J0 409 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 AKAP1Q92667 903 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 C7orf34Q96L11 122 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ZC4H2Q9NQZ6 224 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 IMPAD1Q9NX62 359 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ATPIF1Q9UII2 106 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 STUB1Q9UNE7 303 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF451Q9Y4E5 1061 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 HYKKA2RU49 373 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ORC5O43913 435 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF623O75123 536 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 RAF1P04049 648 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 TPOP07202 933 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SSTR4P31391 388 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SOX3P41225 446 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 DSTNP60981 165 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ALDH6A1Q02252 535 aaKnown RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 DBPQ10586 325 aaPredicted RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 GTF2H2Q13888 395 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 GRK1Q15835 563 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SV2CQ496J9 727 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SHEQ5VZ18 495 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 GTF2H2CQ6P1K8 395 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 CATSPERGQ6ZRH7 1159 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ANKRD46Q86W74 232 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SULF1Q8IWU6 871 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 GHDCQ8N2G8 530 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 CLDN22Q8N7P3 220 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 TADA1Q96BN2 335 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 ZBED6CLQ96FA7 236 aaPredicted RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 HEXA-AS1Q9H8Q6 139 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM30AQ9NV96 361 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 TMLHEQ9NVH6 421 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SH3BP4Q9P0V3 963 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 NLKQ9UBE8 527 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SRRDQ9UH36 339 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 DUSP12Q9UNI6 340 aa7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 MRPL42Q9Y6G3 142 aaKnown RBP7.75□□□□□ -1.17
HMGXB4-202ENST00000418170 SH3D21A4FU49 640 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 FABP7O15540 132 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 IFNA16P05015 189 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 HMGCS1Q01581 520 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC10A7Q0GE19 358 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 USP39Q53GS9 565 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 CLLU1Q5K131 121 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 DDI2Q5TDH0 399 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 GPR139Q6DWJ6 353 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL17Q6TDP4 642 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TRIM69Q86WT6 500 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ADGRG3Q86Y34 549 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 FAM217AQ8IXS0 508 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TOP6BLQ8N6T0 577 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 CLHC1Q8NHS4 586 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 AGO3Q9H9G7 860 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 GALNT9Q9HCQ5 603 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM184CQ9NVA4 438 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 NUDT4Q9NZJ9 180 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PLEKHB1Q9UF11 243 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 POFUT2Q9Y2G5 429 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 NUP214P35658 2090 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 FAM240BA0A1B0GVZ2 78 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 M0R129 80 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC28A1O00337 649 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 OR1I1O60431 355 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PAGE1O75459 146 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 KCNK5O95279 499 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 IL1AP01583 271 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 RRASP10301 218 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PRKAR1AP10644 381 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 S100A3P33764 101 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 MAN2A2P49641 1150 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 IL2P60568 153 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ABATP80404 500 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 POU4F3Q15319 338 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms