RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 GRK3P35626 688 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 SRSF11Q05519 484 aaKnown RBP20.58■□□□□ 0.89
ACTB-203ENST00000417101 PHKG1Q16816 387 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 BTBD16Q32M84 506 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 MSS51Q4VC12 460 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 SPANXN3Q5MJ09 141 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 CAPN13Q6MZZ7 669 aaPredicted RBP20.58■□□□□ 0.89
ACTB-203ENST00000417101 PDSS2Q86YH6 399 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 GABPB2Q8TAK5 448 aaPredicted RBP20.58■□□□□ 0.89
ACTB-203ENST00000417101 SUN3Q8TAQ9 357 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 SLC13A3Q8WWT9 602 aa20.58■□□□□ 0.89
ACTB-203ENST00000417101 DNALI1O14645 258 aaPredicted RBP20.57■□□□□ 0.88
ACTB-203ENST00000417101 PRAMEF2O60811 474 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 RASAL1O95294 804 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 AHSGP02765 367 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 NPPBP16860 134 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 PLAG1Q6DJT9 500 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 LCTLQ6UWM7 567 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 GFRALQ6UXV0 394 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 ANKRD37Q7Z713 158 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 SLC17A6Q9P2U8 582 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 NAALAD2Q9Y3Q0 740 aa20.57■□□□□ 0.88
ACTB-203ENST00000417101 ZNF860A6NHJ4 632 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 HIST1H2AGP0C0S8 130 aaPredicted RBP20.56■□□□□ 0.88
ACTB-203ENST00000417101 SLC35G6P0C7Q6 338 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 HIST1H2ADP20671 130 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 AGTR2P50052 363 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 PGGT1BP53609 377 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 ZXDCQ2QGD7 858 aaPredicted RBP20.56■□□□□ 0.88
ACTB-203ENST00000417101 BBS9Q3SYG4 887 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 FCRLBQ6BAA4 426 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 KIAA0408Q6ZU52 694 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 IGDCC3Q8IVU1 814 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 CNTN4Q8IWV2 1026 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 MFSD9Q8NBP5 474 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 PYCR2Q96C36 320 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 HIST1H2AHQ96KK5 128 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 HIST1H2AJQ99878 128 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 HAUS8Q9BT25 410 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 NAT9Q9BTE0 207 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 H2AFJQ9BTM1 129 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 RBCK1Q9BYM8 510 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 FAM129AQ9BZQ8 928 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 DDX47Q9H0S4 455 aaKnown RBP20.56■□□□□ 0.88
ACTB-203ENST00000417101 ARL15Q9NXU5 204 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 ABI3Q9P2A4 366 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 SCN3AQ9NY46 2000 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 CPAMD8Q8IZJ3 1885 aa20.56■□□□□ 0.88
ACTB-203ENST00000417101 PABPN1LA6NDY0 278 aaKnown RBP20.55■□□□□ 0.88
ACTB-203ENST00000417101 UNC5CO95185 931 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 TSPAN12O95859 305 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 CRYABP02511 175 aaKnown RBP20.55■□□□□ 0.88
ACTB-203ENST00000417101 MYBL2P10244 700 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 MST1P26927 711 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 IL2P60568 153 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 MEF2AQ02078 507 aaPredicted RBP20.55■□□□□ 0.88
ACTB-203ENST00000417101 PDAP1Q13442 181 aaKnown RBP20.55■□□□□ 0.88
ACTB-203ENST00000417101 DNAJB8Q8NHS0 232 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 RELTQ969Z4 430 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 CERS2Q96G23 380 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 PEX11GQ96HA9 241 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 ZNF354BQ96LW1 612 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 KCNK13Q9HB14 408 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 PPANQ9NQ55 473 aaKnown RBP20.55■□□□□ 0.88
ACTB-203ENST00000417101 SNX12Q9UMY4 172 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 SLC22A7Q9Y694 548 aa20.55■□□□□ 0.88
ACTB-203ENST00000417101 OR1F1O43749 312 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 CDC123O75794 336 aaPredicted RBP20.54■□□□□ 0.88
ACTB-203ENST00000417101 CCR8P51685 355 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 PMP22Q01453 160 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 ABRAXAS2Q15018 415 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 ACER2Q5QJU3 275 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 DUPD1Q68J44 220 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 H3F3CQ6NXT2 135 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 TMEM207Q6UWW9 146 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 PCGF5Q86SE9 256 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 SLC34A3Q8N130 599 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 BEST3Q8N1M1 668 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 GPATCH11Q8N954 259 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 ABHD11Q8NFV4 315 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 OR5T3Q8NGG3 340 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 MOCOSQ96EN8 888 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 SNF8Q96H20 258 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 PLAC1Q9HBJ0 212 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 SEC14L3Q9UDX4 400 aa20.54■□□□□ 0.88
ACTB-203ENST00000417101 SCN2AQ99250 2005 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 TRGV8A0A0C4DH27 118 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 CES2O00748 559 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 NDUFS4O43181 175 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 ST13P50502 369 aaKnown RBP20.53■□□□□ 0.88
ACTB-203ENST00000417101 AP1S2P56377 157 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 RHAGQ02094 409 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 ACTN3Q08043 901 aaPredicted RBP20.53■□□□□ 0.88
ACTB-203ENST00000417101 HERC3Q15034 1050 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 NSDHLQ15738 373 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 EXT1Q16394 746 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 SFT2D3Q587I9 215 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 ZNF766Q5HY98 468 aa20.53■□□□□ 0.88
ACTB-203ENST00000417101 HP1BP3Q5SSJ5 553 aaPredicted RBP20.53■□□□□ 0.88
ACTB-203ENST00000417101 TEDDM1Q5T9Z0 273 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms