RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 MRNIPQ6NTE8 343 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 BNC2Q6ZN30 1099 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-202ENST00000416769 LANCL3Q6ZV70 420 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 NEK10Q6ZWH5 1172 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 SDCCAG8Q86SQ7 713 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-202ENST00000416769 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ARHGEF39Q8N4T4 335 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 MREGQ8N565 214 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 CDKL2Q92772 493 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 SLC22A18Q96BI1 424 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 TCF12Q99081 682 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 TTC1Q99614 292 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 GTF3C1Q12789 2109 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 A0A0A6YYC8 382 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 TARM1B6A8C7 271 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 GOLGA8KD6RF30 607 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 GOLGA8TH3BQL2 631 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 I3L1I5 382 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 PFDN6O15212 129 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 SRPX2O60687 465 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ACSL3O95573 720 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 OGNP20774 298 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 TSTA3Q13630 321 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 SLC29A2Q14542 456 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF630Q2M218 657 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 TEDDM1Q5T9Z0 273 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 TMEM207Q6UWW9 146 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 CAPN12Q6ZSI9 719 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 PRSS41Q7RTY9 318 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 GALNT7Q86SF2 657 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 CSNK1A1LQ8N752 337 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 PPFIBP2Q8ND30 876 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 FBF1Q8TES7 1133 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 HAS2Q92819 552 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ZUFSPQ96AP4 578 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 NPAS2Q99743 824 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ZFYVE21Q9BQ24 234 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 MACROD1Q9BQ69 325 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 FAM167BQ9BTA0 163 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 IARS2Q9NSE4 1012 aaKnown RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ANKRD10Q9NXR5 420 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 SEC14L3Q9UDX4 400 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 KLK4Q9Y5K2 254 aa12.22□□□□□ -0.45
LINC00339-202ENST00000416769 KLF2Q9Y5W3 355 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-202ENST00000416769 ITPR3Q14573 2671 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 A0A1W2PQ72 361 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 ARHGEF33A8MVX0 844 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 KDM1AO60341 852 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 SEC24DO94855 1032 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 RASAL1O95294 804 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 BMP10O95393 424 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 C1QAP02745 245 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 UQCRHP07919 91 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 KIR3DL1P43629 444 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 TTPAP49638 278 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 RIPPLY3P57055 190 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF33BQ06732 778 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 NAB1Q13506 487 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 DSG2Q14126 1118 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 TMED2Q15363 201 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 MUM1Q2TAK8 710 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 KIAA0408Q6ZU52 694 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 PAQR7Q86WK9 346 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF808Q8N4W9 903 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 HMGCLL1Q8TB92 370 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 RAD51AP1Q96B01 352 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 MMABQ96EY8 250 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-202ENST00000416769 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 CYTH2Q99418 400 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 ACSS3Q9H6R3 686 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 ABI3Q9P2A4 366 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 FBXO5Q9UKT4 447 aa12.21□□□□□ -0.45
LINC00339-202ENST00000416769 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms