RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 IMMP1LQ96LU5 166 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 CYTH2Q99418 400 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 NAPGQ99747 312 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 MACROD1Q9BQ69 325 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SARGQ9BW04 601 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 VN1R1Q9GZP7 353 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 C19orf25Q9UFG5 118 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 ERRFI1Q9UJM3 462 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SLC22A7Q9Y694 548 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SCN2AQ99250 2005 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 PRRC2CQ9Y520 2896 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 TRAV17A0A0B4J275 112 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 WIPF3A6NGB9 483 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 JRKO75564 520 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 SLC35G6P0C7Q6 338 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 RNF224P0DH78 156 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 EDN3P14138 238 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 XCR1P46094 333 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 MINDY4Q4G0A6 757 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 MFSD4BQ5TF39 518 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 FAM180AQ6UWF9 173 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 PRSS41Q7RTY9 318 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 KCT2Q8NC54 265 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 OR4K1Q8NGD4 311 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 ZCCHC10Q8TBK6 192 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 C5orf34Q96MH7 638 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 OLFM1Q99784 485 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 TRIM51Q9BSJ1 452 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 PLA2G3Q9NZ20 509 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 HCN3Q9P1Z3 774 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 ZFATQ9P243 1243 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 RNF14Q9UBS8 474 aa16.63■□□□□ 0.25
PDLIM2-208ENST00000416159 SGK494L7N484 410 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 NDC80O14777 642 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 TTI1O43156 1089 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 SEC31AO94979 1220 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 LDLRP01130 860 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 CELA2AP08217 269 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 ITGAMP11215 1152 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 IL10P22301 178 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 AGTR2P50052 363 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 TNFSF10P50591 281 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 EFNA3P52797 238 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 MGAT5Q09328 741 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 ZXDCQ2QGD7 858 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 NKAPQ8N5F7 415 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 BCORP1Q8N888 145 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 PYCR2Q96C36 320 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 WDR83Q9BRX9 315 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 RNF32Q9H0A6 362 aa16.62■□□□□ 0.25
PDLIM2-208ENST00000416159 TRBC2A0A5B9 178 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 EFCAB8A8MWE9 144 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 OR1F1O43749 312 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 GUCA1CO95843 209 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 MYBL2P10244 700 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 PGGT1BP53609 377 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 PDIA2Q13087 525 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 PWP1Q13610 501 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 CSHL1Q14406 222 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 HERC3Q15034 1050 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 ABHD17BQ5VST6 288 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 NIPAL1Q6NVV3 410 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 ANKMY2Q8IV38 441 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 FBXO36Q8NEA4 188 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 PLPP5Q8NEB5 264 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 OR4K3Q96R72 315 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 TRIM31Q9BZY9 425 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 MOCS1Q9NZB8 636 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 TEKT2Q9UIF3 430 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 NAALAD2Q9Y3Q0 740 aa16.61■□□□□ 0.25
PDLIM2-208ENST00000416159 E7ESA3 106 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 E2F3O00716 465 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 RDH16O75452 317 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 WDPCPO95876 746 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 ZNF37AP17032 561 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 SKP1P63208 163 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 MEF2AQ02078 507 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 ILF2Q12905 390 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 INAQ16352 499 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 PLAG1Q6DJT9 500 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 HIST2H2BCQ6DN03 193 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 SBSNQ6UWP8 590 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 TMEM207Q6UWW9 146 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 LANCL3Q6ZV70 420 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 STRA8Q7Z7C7 330 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 ZC3HC1Q86WB0 502 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 PDSS2Q86YH6 399 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 AFAP1L2Q8N4X5 818 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 BBOF1Q8ND07 529 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 SLC5A11Q8WWX8 675 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 OR1F2PQ96R84 312 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 OLAHQ9NV23 265 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 NSMCE4AQ9NXX6 385 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 STMN3Q9NZ72 180 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 DYRK1BQ9Y463 629 aa16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 PSAT1Q9Y617 370 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms