RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ABHD11Q8NFV4 315 aa23.65■■□□□ 1.38
HLA-C-204ENST00000415537 VPS39Q96JC1 886 aa23.65■■□□□ 1.38
HLA-C-204ENST00000415537 PTGFRNQ9P2B2 879 aa23.65■■□□□ 1.38
HLA-C-204ENST00000415537 CNTRLQ7Z7A1 2325 aa23.64■■□□□ 1.38
HLA-C-204ENST00000415537 LOC102723996A0A087X1L8 192 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 SGK494L7N484 410 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 XCR1P46094 333 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 SNRPNP63162 240 aaKnown RBP23.64■■□□□ 1.37
HLA-C-204ENST00000415537 ARG2P78540 354 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 MEF2AQ02078 507 aaPredicted RBP23.64■■□□□ 1.37
HLA-C-204ENST00000415537 ZXDCQ2QGD7 858 aaPredicted RBP23.64■■□□□ 1.37
HLA-C-204ENST00000415537 SBSNQ6UWP8 590 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 TMEM207Q6UWW9 146 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 RIPOR1Q6ZS17 1223 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 CAPN12Q6ZSI9 719 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 BRIX1Q8TDN6 353 aaKnown RBP23.64■■□□□ 1.37
HLA-C-204ENST00000415537 PYROXD1Q8WU10 500 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 OR4K3Q96R72 315 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 ZNF700Q9H0M5 742 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 HCN3Q9P1Z3 774 aa23.64■■□□□ 1.37
HLA-C-204ENST00000415537 DYTNA2CJ06 578 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 FAM187AA6NFU0 413 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 JRKO75564 520 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 CBX6O95503 412 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 CYC1P08574 325 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 GP1BBP13224 206 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 MRPS25P82663 173 aaKnown RBP23.63■■□□□ 1.37
HLA-C-204ENST00000415537 ILF2Q12905 390 aaKnown RBP23.63■■□□□ 1.37
HLA-C-204ENST00000415537 B3GNTL1Q67FW5 361 aaPredicted RBP23.63■■□□□ 1.37
HLA-C-204ENST00000415537 SIRT6Q8N6T7 355 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 OR4K1Q8NGD4 311 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 SSC4DQ8WTU2 575 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 ANKRD7Q92527 254 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 PSMG3-AS1Q96PY0 264 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 CYTH2Q99418 400 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 TUBB6Q9BUF5 446 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 SARGQ9BW04 601 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 VN1R1Q9GZP7 353 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 DPH5Q9H2P9 285 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 C19orf25Q9UFG5 118 aaPredicted RBP23.63■■□□□ 1.37
HLA-C-204ENST00000415537 DYRK1BQ9Y463 629 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 SLC22A7Q9Y694 548 aa23.63■■□□□ 1.37
HLA-C-204ENST00000415537 TRBC2A0A5B9 178 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 ANKUB1A6NFN9 424 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 FANCGO15287 622 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 NDUFS4O43181 175 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 SEMA7AO75326 666 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 SERPIND1P05546 499 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 TSFMP43897 325 aaKnown RBP23.62■■□□□ 1.37
HLA-C-204ENST00000415537 SLC12A2P55011 1212 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 ZNF460Q14592 562 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 HERC3Q15034 1050 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 PCOLCEQ15113 449 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 CATSPEREQ5SY80 951 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 SPATA4Q8NEY3 305 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 SLC5A11Q8WWX8 675 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 CDKL2Q92772 493 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 NEIL2Q969S2 332 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 EGFL8Q99944 293 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 ERP44Q9BS26 406 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 RHOJQ9H4E5 214 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 WHRNQ9P202 907 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 TXNDC16Q9P2K2 825 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 IKZF3Q9UKT9 509 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 NAALAD2Q9Y3Q0 740 aa23.62■■□□□ 1.37
HLA-C-204ENST00000415537 LRRK2Q5S007 2527 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 NPEPPSL1A6NEC2 478 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CYSRT1A8MQ03 144 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CDC7O00311 574 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 RDH16O75452 317 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CASQ1P31415 396 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 TAS2R39P59534 338 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 SKP1P63208 163 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 RGS1Q08116 209 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CBLBQ13191 982 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 PWP1Q13610 501 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 PPP1R3AQ16821 1122 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 FRA10AC1Q70Z53 315 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CPEB2Q7Z5Q1 589 aaKnown RBP23.61■■□□□ 1.37
HLA-C-204ENST00000415537 THOC6Q86W42 341 aaKnown RBP23.61■■□□□ 1.37
HLA-C-204ENST00000415537 CATSPER1Q8NEC5 780 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 PSMF1Q92530 271 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 TSNARE1Q96NA8 513 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 BARD1Q99728 777 aaKnown RBP23.61■■□□□ 1.37
HLA-C-204ENST00000415537 GPAMQ9HCL2 828 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 SAYSD1Q9NPB0 183 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 NTNG1Q9Y2I2 539 aa23.61■■□□□ 1.37
HLA-C-204ENST00000415537 SCN2AQ99250 2005 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 IL10P22301 178 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 SOX11P35716 441 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 PDSS2Q86YH6 399 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 OR1N1Q8NGS0 311 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 POPDC3Q9HBV1 291 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 CTNNAL1Q9UBT7 734 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 OARD1Q9Y530 152 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 KCNE2Q9Y6J6 123 aa23.6■■□□□ 1.37
HLA-C-204ENST00000415537 EIF3HO15372 352 aaKnown RBP eCLIP23.59■■□□□ 1.37
HLA-C-204ENST00000415537 RAD51CO43502 376 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 SEC24DO94855 1032 aaPredicted RBP23.59■■□□□ 1.37
HLA-C-204ENST00000415537 CELA2AP08217 269 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms