RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 HMOX2P30519 316 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 EMP3P54852 163 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 PRDX1Q06830 199 aaKnown RBP14.91□□□□□ -0.02
SHMT2-202ENST00000414700 PCDH1Q08174 1060 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 TMED1Q13445 227 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 TUBB3Q13509 450 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 CCNIQ14094 377 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 E2F2Q14209 437 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 SF1Q15637 639 aaKnown RBP14.91□□□□□ -0.02
SHMT2-202ENST00000414700 GGTA1PQ4G0N0 100 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 KIAA1614Q5VZ46 1190 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 IL27RAQ6UWB1 636 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 NXPE4Q6UWF7 544 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 C17orf64Q86WR6 236 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 MINDY1Q8N5J2 469 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 ARL10Q8N8L6 244 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 ICA1LQ8NDH6 482 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 OR2L3Q8NG85 312 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 OR2T11Q8NH01 316 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 C19orf60Q96EN9 201 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 HAUS8Q9BT25 410 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 SLC6A20Q9NP91 592 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 TBCCD1Q9NVR7 557 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 HRASLS2Q9NWW9 162 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 VTI1BQ9UEU0 232 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 PCDHB11Q9Y5F2 797 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 PCDHGA5Q9Y5G8 931 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 ARHGAP10A1A4S6 786 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 GSAPA4D1B5 854 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SLCO1B7G3V0H7 640 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 CER1O95813 267 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SYPP08247 313 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 CCT8P50990 548 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 FOLH1Q04609 750 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SLBPQ14493 270 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 NADK2Q4G0N4 442 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 LIPJQ5W064 366 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 ATG9BQ674R7 924 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 FAM129CQ86XR2 697 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SLC26A7Q8TE54 656 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 OR2A14Q96R47 310 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SLC38A3Q99624 504 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 FAM86C1Q9NVL1 165 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 LRIT1Q9P2V4 623 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 CCDC160A6NGH7 325 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 KHNYNO15037 678 aaKnown RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 DENRO43583 198 aaKnown RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SIGLEC6O43699 453 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 UGDHO60701 494 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 PDYNP01213 254 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SERPINA6P08185 405 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 C1GALT1C1LP0DN25 315 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 HOXB3P14651 431 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 CASP2P42575 452 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 HK2P52789 917 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 TRIP10Q15642 601 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 ADRM1Q16186 407 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 LAIR1Q6GTX8 287 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 GRHL2Q6ISB3 625 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 PLD3Q8IV08 490 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 OR4C6Q8NH72 309 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 MAELQ96JY0 434 aaKnown RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 FAR2Q96K12 515 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 RILPQ96NA2 401 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 KLHL25Q9H0H3 589 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 PCBD2Q9H0N5 130 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 Q9H521 79 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 STN1Q9H668 368 aaKnown RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 RXFP3Q9NSD7 469 aa14.9□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF490Q9ULM2 529 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-202ENST00000414700 RIF1Q5UIP0 2472 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 LY6G6EA0A0G2JKS1 128 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 FEZF1A0PJY2 475 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 E9PBE3 544 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 MANBAO00462 879 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 DFNA5O60443 496 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 KLHL41O60662 606 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 UBXN7O94888 489 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 UGT2B7P16662 529 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 ALDH4A1P30038 563 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 LSSP48449 732 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 LSM12Q3MHD2 195 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 TMEM198Q66K66 360 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 BORAQ6PGQ7 559 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 Q6ZSR9 355 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 AFAP1L2Q8N4X5 818 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 EID2Q8N6I1 236 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 METTL25Q8N6Q8 603 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 ABHD11Q8NFV4 315 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 WDR20Q8TBZ3 569 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 APOLD1Q96LR9 279 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 MTERF1Q99551 399 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 SIKE1Q9BRV8 207 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 DPH7Q9BTV6 452 aa14.89□□□□□ -0.03
SHMT2-202ENST00000414700 MRPS30Q9NP92 439 aaKnown RBP14.89□□□□□ -0.03
SHMT2-202ENST00000414700 TCF7L2Q9NQB0 619 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms