RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TOXO94900 526 aa9□□□□□ -0.97
RFFL-203ENST00000413582 SP1P08047 785 aa9□□□□□ -0.97
RFFL-203ENST00000413582 KLK2P20151 261 aa9□□□□□ -0.97
RFFL-203ENST00000413582 NME2P22392 152 aa9□□□□□ -0.97
RFFL-203ENST00000413582 CHRNB4P30926 498 aa9□□□□□ -0.97
RFFL-203ENST00000413582 STIP1P31948 543 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 ACVR1Q04771 509 aa9□□□□□ -0.97
RFFL-203ENST00000413582 DHX34Q14147 1143 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 FAM53BQ14153 422 aa9□□□□□ -0.97
RFFL-203ENST00000413582 OASLQ15646 514 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 P3H1Q32P28 736 aa9□□□□□ -0.97
RFFL-203ENST00000413582 TSTD2Q5T7W7 516 aa9□□□□□ -0.97
RFFL-203ENST00000413582 SLC25A25Q6KCM7 469 aa9□□□□□ -0.97
RFFL-203ENST00000413582 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 ANKRD37Q7Z713 158 aa9□□□□□ -0.97
RFFL-203ENST00000413582 CD163Q86VB7 1156 aa9□□□□□ -0.97
RFFL-203ENST00000413582 LGI4Q8N135 537 aa9□□□□□ -0.97
RFFL-203ENST00000413582 CPSF7Q8N684 471 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 CHDHQ8NE62 594 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 OR52K1Q8NGK4 314 aa9□□□□□ -0.97
RFFL-203ENST00000413582 FAM57AQ8TBR7 257 aa9□□□□□ -0.97
RFFL-203ENST00000413582 SKA2Q8WVK7 121 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 NINJ1Q92982 152 aa9□□□□□ -0.97
RFFL-203ENST00000413582 MAGOHBQ96A72 148 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 ZNF778Q96MU6 729 aa9□□□□□ -0.97
RFFL-203ENST00000413582 CYTH2Q99418 400 aa9□□□□□ -0.97
RFFL-203ENST00000413582 OLFM1Q99784 485 aa9□□□□□ -0.97
RFFL-203ENST00000413582 ZNF559Q9BR84 538 aa9□□□□□ -0.97
RFFL-203ENST00000413582 GSX1Q9H4S2 264 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 MRPS30Q9NP92 439 aaKnown RBP9□□□□□ -0.97
RFFL-203ENST00000413582 MMP25Q9NPA2 562 aa9□□□□□ -0.97
RFFL-203ENST00000413582 DLL4Q9NR61 685 aa9□□□□□ -0.97
RFFL-203ENST00000413582 KCNN3Q9UGI6 736 aa9□□□□□ -0.97
RFFL-203ENST00000413582 RIMKLBQ9ULI2 386 aa9□□□□□ -0.97
RFFL-203ENST00000413582 CSPG4Q6UVK1 2322 aa9□□□□□ -0.97
RFFL-203ENST00000413582 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
RFFL-203ENST00000413582 OR2W5A6NFC9 320 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 FAM187AA6NFU0 413 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 TMEM200CA6NKL6 621 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 H0YIG0 161 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 LIASO43766 372 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 SLC25A12O75746 678 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 SUN1O94901 812 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 HOXD4P09016 255 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 EZRP15311 586 aaKnown RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 COILP38432 576 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 CCNFP41002 786 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 AGTR2P50052 363 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 GDF10P55107 478 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 PPP2R2AP63151 447 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 OC90Q02509 493 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 FOLH1Q04609 750 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 FOXD4Q12950 439 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 EXT1Q16394 746 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 MINDY4Q4G0A6 757 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 FASTKD1Q53R41 847 aaKnown RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 MFSD4BQ5TF39 518 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 ZNF468Q5VIY5 522 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 SUSD1Q6UWL2 747 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 C4orf22Q6V702 233 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 CEP128Q6ZU80 1094 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 PRSS41Q7RTY9 318 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 LDB1Q86U70 411 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 TAB3Q8N5C8 712 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 SLC5A8Q8N695 610 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 HORMAD2Q8N7B1 307 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 FAM71DQ8N9W8 422 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 OR9A4Q8NGU2 314 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 OR4L1Q8NH43 312 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 LILRB4Q8NHJ6 448 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 GSDMBQ8TAX9 411 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 M1APQ8TC57 530 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 C1orf54Q8WWF1 131 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 ASB5Q8WWX0 329 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 RERGQ96A58 199 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 PANX3Q96QZ0 392 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 UCK2Q9BZX2 261 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 P2RY12Q9H244 342 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 CCM2LQ9NUG4 571 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 LRFN1Q9P244 771 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 MARCH4Q9P2E8 410 aaPredicted RBP8.99□□□□□ -0.97
RFFL-203ENST00000413582 RNF6Q9Y252 685 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 HRH3Q9Y5N1 445 aa8.99□□□□□ -0.97
RFFL-203ENST00000413582 A0A1B0GTH9 108 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 ARHGEF33A8MVX0 844 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 TXNDC9O14530 226 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 NDC80O14777 642 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 HAT1O14929 419 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 MATN4O95460 622 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 NSA2O95478 260 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 STATHP02808 62 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 TPOP07202 933 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PKMP14618 531 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 RPA3P35244 121 aaPredicted RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 PTGS2P35354 604 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 XCR1P46094 333 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 AVPR1BP47901 424 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PRAMEP78395 509 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 RELAQ04206 551 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms