RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 UGT1A6P19224 532 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 DCTP40126 519 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 CDR2Q01850 454 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 PDE7AQ13946 482 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR4C11Q6IEV9 310 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 G2E3Q7L622 706 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 CPEB2Q7Z5Q1 589 aaKnown RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 PIGZQ86VD9 579 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCDC60Q8IWA6 550 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 STPG4Q8N801 248 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCNYQ8ND76 341 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SAP25Q8TEE9 199 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC13A3Q8WWT9 602 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 FCAMRQ8WWV6 532 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 GGHQ92820 318 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 NAP1L3Q99457 506 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRMT1Q99873 361 aaKnown RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 C1orf21Q9H246 121 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SYTL2Q9HCH5 934 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRMT8Q9NR22 394 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZCCHC3Q9NUD5 404 aaKnown RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 INTS9Q9NV88 658 aaKnown RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 FLRT3Q9NZU0 649 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 TMED7Q9Y3B3 224 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 DHX29Q7Z478 1369 aaKnown RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCDC162PA2VCL2 907 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC9B1P1A6NJY1 282 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 M0R296 226 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 TLR4O00206 839 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ACOT8O14734 319 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 PSMD3O43242 534 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRPSAP2O60256 369 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 KIF5CO60282 957 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 GRAP2O75791 330 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ALPPP05187 535 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ALPPL2P10696 532 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 CD59P13987 128 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 STARD6P59095 220 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 RPP38P78345 283 aaKnown RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 MYL7Q01449 175 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC3A1Q07837 685 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 FHL1Q13642 323 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 STXBP2Q15833 593 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ACCSLQ4AC99 568 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZC2HC1CQ53FD0 456 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCNYL2Q5T2Q4 361 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ARHGEF16Q5VV41 709 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 TMEM207Q6UWW9 146 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 RBMS3Q6XE24 437 aaKnown RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC24A5Q71RS6 500 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC16A9Q7RTY1 509 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 MIER3Q7Z3K6 550 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 C5orf24Q7Z6I8 188 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZDHHC17Q8IUH5 632 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 SAMD14Q8IZD0 417 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR4C3Q8NH37 302 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 TM9SF4Q92544 642 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 DTD2Q96FN9 168 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 FAM213AQ9BRX8 229 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 XPO4Q9C0E2 1151 aaKnown RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 MAGEF1Q9HAY2 307 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 NINJ2Q9NZG7 142 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR6C2Q9NZP2 312 aa4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRMT6Q9UJA5 497 aaKnown RBP4.3□□□□□ -1.72
HMGB3P31-201ENST00000413333 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 C2CD4DB7Z1M9 353 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 EXTL3O43909 919 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 FGF17O60258 216 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 GLRA3O75311 464 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRDM1O75626 825 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 PTMAP06454 111 aaKnown RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 CHRNGP07510 517 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 YES1P07947 543 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 NUDT17P0C025 328 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCDC192P0DO97 292 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 EZRP15311 586 aaKnown RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 AHCYP23526 432 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 SRD5A2P31213 254 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR3A3P47888 321 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRA2AQ13595 282 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 CDH18Q13634 790 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 P2RY6Q15077 328 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 EXT1Q16394 746 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 TOR1AIP1Q5JTV8 583 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 DHRS11Q6UWP2 260 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 ISLR2Q6UXK2 745 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZNF771Q7L3S4 317 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC26A9Q7LBE3 791 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 KIRREL3Q8IZU9 778 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC37A3Q8NCC5 494 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR52E1Q8NGJ3 308 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 EXOC6Q8TAG9 804 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 ULK4Q96C45 1275 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms